RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TBCBQ99426 244 aa14.49□□□□□ -0.09
SNRPA1-216ENST00000626000 DNAJC7Q99615 494 aa14.49□□□□□ -0.09
SNRPA1-216ENST00000626000 PIGVQ9NUD9 493 aa14.49□□□□□ -0.09
SNRPA1-216ENST00000626000 PLK2Q9NYY3 685 aa14.49□□□□□ -0.09
SNRPA1-216ENST00000626000 COX16Q9P0S2 106 aa14.49□□□□□ -0.09
SNRPA1-216ENST00000626000 PIEZO1Q92508 2521 aa14.49□□□□□ -0.09
SNRPA1-216ENST00000626000 SSU72P8A0A1W2PR75 194 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 TSPAN3O60637 253 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 TBL1XO60907 577 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 LUC7L3O95232 432 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 FTLP02792 175 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 ASLP04424 464 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 PABPC1P11940 636 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 NTSR1P30989 418 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 SLC6A4P31645 630 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 ZNF143P52747 638 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 BYSLQ13895 437 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 STARD3Q14849 445 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 CRY1Q16526 586 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 C2CD6Q53TS8 623 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 RAP1GAP2Q684P5 730 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 HGSNATQ68CP4 663 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 NAIF1Q69YI7 327 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 NADSYN1Q6IA69 706 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 CHST9Q7L1S5 443 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 CHPFQ8IZ52 775 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 LGI2Q8N0V4 545 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 TSTD1Q8NFU3 115 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 FNIP1Q8TF40 1166 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 RXFP2Q8WXD0 754 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 CFAP57Q96MR6 1250 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 RPRD1AQ96P16 312 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 PRMT1Q99873 361 aaKnown RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 CNPY3Q9BT09 278 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 TKTL2Q9H0I9 626 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 ISCUQ9H1K1 167 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 KIAA1522Q9P206 1035 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 EBF1Q9UH73 591 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 LCMT1Q9UIC8 334 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 PLA2G4CQ9UP65 541 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 FANCMQ8IYD8 2048 aa14.48□□□□□ -0.09
SNRPA1-216ENST00000626000 EIF3CLB5ME19 914 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 H0Y626 953 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 K7ESF4 209 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 DDX3XO00571 662 aaKnown RBP eCLIP14.47□□□□□ -0.092e-19■■■□□ 18.1
SNRPA1-216ENST00000626000 PAGE1O75459 146 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 CLDN11O75508 207 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 KLF8O95600 359 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 RFC1P35251 1148 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 TIE1P35590 1138 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 SEC13P55735 322 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 PITX1P78337 314 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 SULT2A1Q06520 285 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 ACAP1Q15027 740 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 C5orf22Q49AR2 442 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 E4F1Q66K89 784 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 PLEKHA7Q6IQ23 1121 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 RFWD3Q6PCD5 774 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 WDR5BQ86VZ2 330 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 IL17RCQ8NAC3 791 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 KDM1BQ8NB78 822 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 CENPIQ92674 756 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 NKD2Q969F2 451 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 NTAN1Q96AB6 310 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 MRFAP1L1Q96HT8 127 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 PRICKLE1Q96MT3 831 aaPredicted RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 MCEEQ96PE7 176 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 EIF3CQ99613 913 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 DEF6Q9H4E7 631 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 FBRSQ9HAH7 460 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 ELOVL2Q9NXB9 296 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 DONSONQ9NYP3 566 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 ADAMTS1Q9UHI8 967 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 GGA2Q9UJY4 613 aa14.47□□□□□ -0.09
SNRPA1-216ENST00000626000 TCRBV5S1A1TA0A578 114 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 LILRB5O75023 590 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 MFAP3LO75121 409 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 SKILP12757 684 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 TDGF1P13385 188 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 HOXB2P14652 356 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 POLR2EP19388 210 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 RRM1P23921 792 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 HLA-FP30511 346 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 CDH4P55283 916 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 RPS24P62847 133 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 ATP11AP98196 1134 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 NRG1Q02297 640 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 AUHQ13825 339 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 CCDC14Q49A88 953 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 PPP1R15BQ5SWA1 713 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 OTUD1Q5VV17 481 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 WDR59Q6PJI9 974 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 KIAA0907Q7Z7F0 614 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 EMC1Q8N766 993 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 TXNDC5Q8NBS9 432 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 ZNF653Q96CK0 615 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 GABRG3Q99928 467 aa14.46□□□□□ -0.09
SNRPA1-216ENST00000626000 CIPCQ9C0C6 399 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms