RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 B3GNT3Q9Y2A9 372 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 HS3ST3A1Q9Y663 406 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 SPATA31A1Q5TZJ5 1347 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 SAC3D1A6NKF1 404 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 C16orf96A6NNT2 1141 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 H7C1Q1 480 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 EPB41L2O43491 1005 aaKnown RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 GCP02774 474 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 XBP1P17861 261 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 WT1P19544 449 aaPredicted RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 SLC8A1P32418 973 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 PNPLA4P41247 253 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 CACNA2D1P54289 1103 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 SLC37A1P57057 533 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 MPP1Q00013 466 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 HOXA4Q00056 320 aaPredicted RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 SIM2Q14190 667 aaPredicted RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 KCNB1Q14721 858 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 CNGA3Q16281 694 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 AWAT1Q58HT5 328 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 TMED8Q6PL24 325 aaPredicted RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 PCSK4Q6UW60 755 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 SLC39A5Q6ZMH5 540 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 DCDC5Q6ZRR9 648 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 DAZAP1Q96EP5 407 aaKnown RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 RBM17Q96I25 401 aaKnown RBP4.58□□□□□ -1.68
CDR1-202ENST00000625883 UROC1Q96N76 676 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 CLPBQ9H078 707 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 SERGEFQ9UGK8 458 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 TMEM98Q9Y2Y6 226 aa4.58□□□□□ -1.68
CDR1-202ENST00000625883 A0A087X1B8 175 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 KLK10O43240 276 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 RHOBTB3O94955 611 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 CYP2D6P10635 497 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 LYL1P12980 280 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 ATP1A3P13637 1013 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 CPA1P15085 419 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 TNFAIP3P21580 790 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 DDIT3P35638 169 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 ACVRL1P37023 503 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 PCP4P48539 62 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 NR1H2P55055 460 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 CDK18Q07002 472 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 MAPK7Q13164 816 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 SLC14A1Q13336 389 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 CBWD5Q5RIA9 395 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 ZNF362Q5T0B9 420 aaPredicted RBP4.57□□□□□ -1.68
CDR1-202ENST00000625883 ADGRF3Q8IZF5 1079 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 AMER2Q8N7J2 671 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 EXD3Q8N9H8 876 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 HVCN1Q96D96 273 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 HS6ST2Q96MM7 605 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 GPR78Q96P69 363 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 AGXT2Q9BYV1 514 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 KLK15Q9H2R5 256 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 CPNE5Q9HCH3 593 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 TLR8Q9NR97 1041 aaKnown RBP4.57□□□□□ -1.68
CDR1-202ENST00000625883 SLC22A11Q9NSA0 550 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 MTMR4Q9NYA4 1195 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 TFCP2L1Q9NZI6 479 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 SLC17A6Q9P2U8 582 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 AFG3L2Q9Y4W6 797 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 LMTK3Q96Q04 1460 aa4.57□□□□□ -1.68
CDR1-202ENST00000625883 NPIPB13A6NJU9 1138 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 NPIPB5A8MRT5 1133 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 NPIPB4C9JG80 1138 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 TSPAN3O60637 253 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 JTBO76095 146 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 HNRNPA1P09651 372 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDR1-202ENST00000625883 HOXD12P35452 270 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 ZNF84P51523 738 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 SHC2P98077 582 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 B4GALNT1Q00973 533 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDR1-202ENST00000625883 DMWDQ09019 674 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 DDX10Q13206 875 aaKnown RBP4.56□□□□□ -1.68
CDR1-202ENST00000625883 THOC5Q13769 683 aaKnown RBP4.56□□□□□ -1.68
CDR1-202ENST00000625883 ERCC6LQ2NKX8 1250 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 WDR45BQ5MNZ6 344 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 TMEM63BQ5T3F8 832 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 ANO7Q6IWH7 933 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 TMEM65Q6PI78 240 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 AMIGO2Q86SJ2 522 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 SLC16A11Q8NCK7 471 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 SRFBP1Q8NEF9 429 aaKnown RBP4.56□□□□□ -1.68
CDR1-202ENST00000625883 GPR150Q8NGU9 434 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 RRP36Q96EU6 259 aaKnown RBP4.56□□□□□ -1.68
CDR1-202ENST00000625883 ZNF845Q96IR2 970 aaPredicted RBP4.56□□□□□ -1.68
CDR1-202ENST00000625883 HIC2Q96JB3 615 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 HTATIP2Q9BUP3 242 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 PHF7Q9BWX1 381 aaPredicted RBP4.56□□□□□ -1.68
CDR1-202ENST00000625883 GATA5Q9BWX5 397 aaPredicted RBP4.56□□□□□ -1.68
CDR1-202ENST00000625883 ASNSD1Q9NWL6 643 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 ASB6Q9NWX5 421 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 SH3BP4Q9P0V3 963 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 HSF4Q9ULV5 492 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 TTC34A8MYJ7 566 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 TARM1B6A8C7 271 aa4.56□□□□□ -1.68
CDR1-202ENST00000625883 BTBD19C9JJ37 291 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms