RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 WNT1P04628 370 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 CD70P32970 193 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 ACADVLP49748 655 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 SGSHP51688 502 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 SLC8A3P57103 927 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 PPP3CAQ08209 521 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 NCEH1Q6PIU2 408 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 WFDC5Q8TCV5 224 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
PNKP-218ENST00000625299 SERGEFQ9UGK8 458 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 MID1O15344 667 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 MSI1O43347 362 aaKnown RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 CALUO43852 315 aaPredicted RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 TBL1XO60907 577 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 RNASEH1O60930 286 aaKnown RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 RNASEH2AO75792 299 aaKnown RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 PDIA4P13667 645 aaKnown RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 GALCP54803 685 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 ZNF445P59923 1031 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 ST8SIA6P61647 398 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 SHBQ15464 509 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 GOLGA7BQ2TAP0 167 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 RAB41Q5JT25 222 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 ADGRF1Q5T601 910 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 DHX40Q8IX18 779 aaKnown RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 ZNF843Q8N446 348 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.29■□□□□ 0.04
PNKP-218ENST00000625299 SAP25Q8TEE9 199 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 TMEM176AQ96HP8 235 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 OMDQ99983 421 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 RSPH9Q9H1X1 276 aaPredicted RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 EBF2Q9HAK2 575 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 LRRC4Q9HBW1 653 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 GDF3Q9NR23 364 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 SERTAD1Q9UHV2 236 aa15.29■□□□□ 0.04
PNKP-218ENST00000625299 HBS1LQ9Y450 684 aaKnown RBP15.29■□□□□ 0.04
PNKP-218ENST00000625299 LRRC72A6NJI9 287 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 TULP2O00295 520 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 CAPN9O14815 690 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 BRINP1O60477 761 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 SIN3BO75182 1162 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 C1SP09871 688 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 CDK4P11802 303 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 KRT13P13646 458 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 CD38P28907 300 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 EPHA8P29322 1005 aaPredicted RBP15.28■□□□□ 0.04
PNKP-218ENST00000625299 ME1P48163 572 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 PDE4CQ08493 712 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 ADIGQ0VDE8 80 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 CCDC173Q0VFZ6 552 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 RFWD3Q6PCD5 774 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 USP30Q70CQ3 517 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 GPR155Q7Z3F1 870 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 SLC4A11Q8NBS3 891 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 UBXN6Q9BZV1 441 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 NRSN2Q9GZP1 204 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 NEUROG2Q9H2A3 272 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 CISHQ9NSE2 258 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 STIM2Q9P246 746 aa15.28■□□□□ 0.04
PNKP-218ENST00000625299 ZNF462Q96JM2 2506 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 WNT9AO14904 365 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 YKT6O15498 198 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 C7P10643 843 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 NR2F2P24468 414 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 ARRB1P49407 418 aaPredicted RBP15.27■□□□□ 0.04
PNKP-218ENST00000625299 RAD23BP54727 409 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 CXADRP78310 365 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 CST6Q15828 149 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 BSPRYQ5W0U4 402 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 PM20D1Q6GTS8 502 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 FBXL19Q6PCT2 694 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 INTS8Q75QN2 995 aaKnown RBP15.27■□□□□ 0.04
PNKP-218ENST00000625299 BHLHA9Q7RTU4 235 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 KIAA0907Q7Z7F0 614 aaPredicted RBP15.27■□□□□ 0.04
PNKP-218ENST00000625299 MMAAQ8IVH4 418 aaKnown RBP15.27■□□□□ 0.04
PNKP-218ENST00000625299 MFN1Q8IWA4 741 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 FAM186BQ8IYM0 893 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 ANKRD52Q8NB46 1076 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 TMEM174Q8WUU8 243 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 TATDN2Q93075 761 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 INTS4Q96HW7 963 aaKnown RBP15.27■□□□□ 0.04
PNKP-218ENST00000625299 SERAC1Q96JX3 654 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 STOML2Q9UJZ1 356 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 SCML1Q9UN30 329 aa15.27■□□□□ 0.04
PNKP-218ENST00000625299 YJEFN3A6XGL0 299 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 E7ENQ6 273 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 LATS1O95835 1130 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 SLFN14P0C7P3 912 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 GLDCP23378 1020 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 PSMD8P48556 350 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 SFSWAPQ12872 951 aaKnown RBP15.26■□□□□ 0.03
PNKP-218ENST00000625299 BNIP3Q12983 259 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 RTP5Q14D33 572 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 RESP18Q5W5W9 173 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 ARHGAP17Q68EM7 881 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 SIX6OS1Q8N1H7 587 aa15.26■□□□□ 0.03
PNKP-218ENST00000625299 OR2T34Q8NGX1 318 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms