RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 MAFO75444 373 aaPredicted RBP16.52■□□□□ 0.23
GABRB3-215ENST00000622697 ACAP1Q15027 740 aa16.52■□□□□ 0.23
GABRB3-215ENST00000622697 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.23
GABRB3-215ENST00000622697 FBXO6Q9NRD1 293 aaPredicted RBP16.52■□□□□ 0.23
GABRB3-215ENST00000622697 SLC17A7Q9P2U7 560 aa16.52■□□□□ 0.23
GABRB3-215ENST00000622697 IRF6O14896 467 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 USP1O94782 785 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 BST1Q10588 318 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 PDK4Q16654 411 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 FOXR2Q6PJQ5 311 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 FOPNLQ96NB1 174 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 LGMNQ99538 433 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 SEPHS2Q99611 448 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 AJAP1Q9UKB5 411 aaPredicted RBP16.51■□□□□ 0.23
GABRB3-215ENST00000622697 TRDMT1O14717 391 aaKnown RBP16.51■□□□□ 0.23
GABRB3-215ENST00000622697 CHADO15335 359 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 PRKAA1Q13131 559 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 WSCD1Q658N2 575 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 OR9Q1Q8NGQ5 310 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 EIF2AQ9BY44 585 aaKnown RBP16.51■□□□□ 0.23
GABRB3-215ENST00000622697 SEMA6AQ9H2E6 1030 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 SAR1AQ9NR31 198 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 MAN1C1Q9NR34 630 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 CRYL1Q9Y2S2 319 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 DISP2A7MBM2 1401 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 C5orf58C9J3I9 102 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 LRRC38Q5VT99 294 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 C11orf74Q86VG3 221 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 MAGEB16A2A368 324 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 KATNA1O75449 491 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 PIGNO95427 931 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 PARNO95453 639 aaKnown RBP16.51■□□□□ 0.23
GABRB3-215ENST00000622697 PSMG1O95456 288 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 MZF1P28698 734 aaPredicted RBP16.51■□□□□ 0.23
GABRB3-215ENST00000622697 HSPA13P48723 471 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 ALDH7A1P49419 539 aaKnown RBP16.51■□□□□ 0.23
GABRB3-215ENST00000622697 JAM2P57087 298 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 UBAP2LQ14157 1087 aaKnown RBP16.51■□□□□ 0.23
GABRB3-215ENST00000622697 MFSD10Q14728 455 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 PKN3Q6P5Z2 889 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 GAD1Q99259 594 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 SH3GL2Q99962 352 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 RNPEPL1Q9HAU8 725 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 CDHR5Q9HBB8 845 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 BLOC1S6Q9UL45 172 aa16.51■□□□□ 0.23
GABRB3-215ENST00000622697 GUCA1CO95843 209 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 GOT1P17174 413 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 SOAT1P35610 550 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 PRAMEF19Q5SWL8 479 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 ALYREFQ86V81 257 aaKnown RBP16.5■□□□□ 0.23
GABRB3-215ENST00000622697 NRDE2Q9H7Z3 1164 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 POPDC2Q9HBU9 364 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 EVPLLA8MZ36 301 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 SLCO1B7G3V0H7 640 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 CST3P01034 146 aaPredicted RBP16.5■□□□□ 0.23
GABRB3-215ENST00000622697 RNF43Q68DV7 783 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 SH3BP5LQ7L8J4 393 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 EFL1Q7Z2Z2 1120 aaKnown RBP16.5■□□□□ 0.23
GABRB3-215ENST00000622697 TMC7Q7Z402 723 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 APBB2Q92870 758 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 TMEM79Q9BSE2 394 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 LRRC4CQ9HCJ2 640 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 SPATA31C2B4DYI2 1134 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 KDM1AO60341 852 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 KRT36O76013 467 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 ATP6V1B2P21281 511 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 PEX5P50542 639 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 JADE3Q92613 823 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 POMKQ9H5K3 350 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 TBC1D23Q9NUY8 699 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 BUD23O43709 281 aaKnown RBP16.5■□□□□ 0.23
GABRB3-215ENST00000622697 TBC1D12O60347 775 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 MAN1A2O60476 641 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 ZC3H12BQ5HYM0 836 aaKnown RBP16.5■□□□□ 0.23
GABRB3-215ENST00000622697 MOB2Q70IA6 237 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 TLK2Q86UE8 772 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 HELQQ8TDG4 1101 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 COL20A1Q9P218 1284 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 SNCAIPQ9Y6H5 919 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 A8MUI8 341 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 HNRNPCL2B2RXH8 293 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 M0R3G1 203 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 UNC5AQ6ZN44 842 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 LPCAT1Q8NF37 534 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 PRPF18Q99633 342 aaKnown RBP16.5■□□□□ 0.23
GABRB3-215ENST00000622697 TBL1YQ9BQ87 522 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 KCNK4Q9NYG8 393 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 EIF3LQ9Y262 564 aaKnown RBP16.5■□□□□ 0.23
GABRB3-215ENST00000622697 TNFSF13BQ9Y275 285 aa16.5■□□□□ 0.23
GABRB3-215ENST00000622697 KIF1AQ12756 1690 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 MBL2P11226 248 aaPredicted RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 FASTKQ14296 549 aaKnown RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 FASTKD3Q14CZ7 662 aaKnown RBP16.49■□□□□ 0.23
GABRB3-215ENST00000622697 ATP6AP1LQ52LC2 224 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 TBCELQ5QJ74 424 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 BBS12Q6ZW61 710 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 CPNE8Q86YQ8 564 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 SPATA6LQ8N4H0 392 aa16.49■□□□□ 0.23
GABRB3-215ENST00000622697 PCDH20Q8N6Y1 951 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms