RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NRG4Q8WWG1 115 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 FAM136AQ96C01 138 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 P2RY11Q96G91 374 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 TNIP3Q96KP6 325 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZNF778Q96MU6 729 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 SLC9A7Q96T83 725 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 TRIM56Q9BRZ2 755 aaKnown RBP9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 DUSP16Q9BY84 665 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 C20orf27Q9GZN8 174 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZNF395Q9H8N7 513 aaPredicted RBP9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 NMRK1Q9NWW6 199 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZFATQ9P243 1243 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 ARMCX1Q9P291 453 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 ANGPTL2Q9UKU9 493 aa9.89□□□□□ -0.83
IGHV3-54-201ENST00000622166 NRCAMQ92823 1304 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 SMIM28A0A1B0GU29 152 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 MBLAC1A4D2B0 266 aaPredicted RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 C9IYK1 514 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 TPP1O14773 563 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 DCLK1O15075 740 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 ITM2AO43736 263 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 CIB2O75838 187 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 ALDOAP04075 364 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 PDGFRBP09619 1106 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 TKTP29401 623 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 GP5P40197 560 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 GARSP41250 739 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 SLC1A6P48664 564 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 HARS2P49590 506 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 AIF1P55008 147 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 GJA9P57773 515 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 PDE1CQ14123 709 aaPredicted RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 PCLAFQ15004 111 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 UBXN11Q5T124 520 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 C6orf163Q5TEZ5 329 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 TMCO4Q5TGY1 634 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 C16orf46Q6P387 395 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 USP50Q70EL3 339 aaPredicted RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 ADGRG6Q86SQ4 1221 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 PIGZQ86VD9 579 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 MYLK4Q86YV6 388 aaPredicted RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 WDR75Q8IWA0 830 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 UNC5BQ8IZJ1 945 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 KIRREL3Q8IZU9 778 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 PDCD7Q8N8D1 485 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 RBM15BQ8NDT2 890 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 APPL2Q8NEU8 664 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 PIWIL2Q8TC59 973 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 SLC2A14Q8TDB8 520 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 STMN2Q93045 179 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 ATP2A3Q93084 1043 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 NTAN1Q96AB6 310 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 LGMNQ99538 433 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 CPNE1Q99829 537 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 OSBPL1AQ9BXW6 950 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 TRIM6Q9C030 488 aaPredicted RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 BRD8Q9H0E9 1235 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 NXF3Q9H4D5 531 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 SETD4Q9NVD3 440 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 STAP1Q9ULZ2 295 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 DNAJC16Q9Y2G8 782 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 LRCH1Q9Y2L9 728 aa9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 ZNF638Q14966 1978 aaKnown RBP9.88□□□□□ -0.83
IGHV3-54-201ENST00000622166 PRR5-ARHGAP8B1AHC4 643 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 CAPN9O14815 690 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 HUS1O60921 280 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 TBX10O75333 385 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 FKBP6O75344 327 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 FBXO21O94952 628 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 POLBP06746 335 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 ITGA2BP08514 1039 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SMIM10L2AP0DMW4 78 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SMIM10L2BP0DMW5 78 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SKIP12755 728 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 PSMB4P28070 264 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 PRDX6P30041 224 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 LRPAP1P30533 357 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 CPOXP36551 454 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 CDK7P50613 346 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SESN2P58004 480 aaPredicted RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 ACTR3P61158 418 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 RPL10AP62906 217 aaKnown RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 ARHGAP8P85298 464 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SCAPQ12770 1279 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 IFRD2Q12894 506 aaPredicted RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 SEMA3BQ13214 749 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 IRF5Q13568 498 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 THOC5Q13769 683 aaKnown RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 MUM1Q2TAK8 710 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 CCDC153Q494R4 210 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 GLRA4Q5JXX5 417 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 CAPRIN2Q6IMN6 1127 aaKnown RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 AAGABQ6PD74 315 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 PAQR9Q6ZVX9 377 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 PDZD4Q76G19 769 aaPredicted RBP9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 RASSF3Q86WH2 238 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 FAM131BQ86XD5 332 aa9.87□□□□□ -0.83
IGHV3-54-201ENST00000622166 ULK2Q8IYT8 1036 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms