RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	PPP4R1	Q8TF05	950 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	NDRG1	Q92597	394 aa	Known RBP	18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	GATA6	Q92908	595 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	P2RY11	Q96G91	374 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	SYBU	Q9NX95	663 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	TXNDC16	Q9P2K2	825 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	ASB3	Q9Y575	518 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	PSMB4	P28070	264 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	TYK2	P29597	1187 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	MLH1	P40692	756 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	TMEM62	Q0P6H9	643 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	DBN1	Q16643	649 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	VWA5B1	Q5TIE3	1220 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	CCNY	Q8ND76	341 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	PIDD1	Q9HB75	910 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	TMEM216	Q9P0N5	145 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	COX16	Q9P0S2	106 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	GTF2IRD1	Q9UHL9	959 aa		18.23	■□□□□ 0.51
CDK16-223	ENST00000622098	MAGEA13P	A6NCF6	341 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	PRKCG	P05129	697 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	LMO2	P25791	158 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	ARRB2	P32121	409 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	COPA	P53621	1224 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	BCAT1	P54687	386 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	LAMC2	Q13753	1193 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	KIZ	Q2M2Z5	673 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	ARHGAP17	Q68EM7	881 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	RASSF3	Q86WH2	238 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	APLF	Q8IW19	511 aa	Predicted RBP	18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	ANKRD52	Q8NB46	1076 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	FAM149B1	Q96BN6	582 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	PGBD4	Q96DM1	585 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	SORT1	Q99523	831 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	ZNF358	Q9NW07	568 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	HACD1	B0YJ81	288 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	KLHL2	O95198	593 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	YY1	P25490	414 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	BAG6	P46379	1132 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	IDH3A	P50213	366 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	EPHB1	P54762	984 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	OLIG2	Q13516	323 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	HACE1	Q8IYU2	909 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	PYDC1	Q8WXC3	89 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	ATXN7L3B	Q96GX2	97 aa		18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	DDX50	Q9BQ39	737 aa	Known RBP	18.22	■□□□□ 0.51
CDK16-223	ENST00000622098	STK10	O94804	968 aa	Known RBP	18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	PROC	P04070	461 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	CMC1	Q7Z7K0	106 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	UNC93A	Q86WB7	457 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	NME8	Q8N427	588 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	ECSIT	Q9BQ95	431 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	EIF2A	Q9BY44	585 aa	Known RBP	18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	STN1	Q9H668	368 aa	Known RBP	18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	COPG2	Q9UBF2	871 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	ADCY6	O43306	1168 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	OPHN1	O60890	802 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	SORBS2	O94875	1100 aa	Known RBP	18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	F7	P08709	466 aa	Predicted RBP	18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	SULT1E1	P49888	294 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	ITGA9	Q13797	1035 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	EFHC1	Q5JVL4	640 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	MOB2	Q70IA6	237 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	SLC2A14	Q8TDB8	520 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	CCDC124	Q96CT7	223 aa	Known RBP	18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	CYP4F11	Q9HBI6	524 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	GPAM	Q9HCL2	828 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	FZD10	Q9ULW2	581 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	RPS6KL1	Q9Y6S9	549 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	ZSWIM8	A7E2V4	1837 aa		18.21	■□□□□ 0.51
CDK16-223	ENST00000622098	CREB3	O43889	395 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	PDE5A	O76074	875 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	FES	P07332	822 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	NCF2	P19878	526 aa	Predicted RBP	18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	PITX1	P78337	314 aa	Predicted RBP	18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	ZNF618	Q5T7W0	954 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	TNS4	Q8IZW8	715 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	DEFB106A	Q8N104	65 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	BEST2	Q8NFU1	509 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	IFT43	Q96FT9	208 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	SNX27	Q96L92	541 aa		18.21	■□□□□ 0.5
CDK16-223	ENST00000622098	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.2	■□□□□ 0.5
CDK16-223	ENST00000622098		H3BRB1	525 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	ZCCHC18	P0CG32	403 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	CYP2C8	P10632	490 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	RALB	P11234	206 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	GRK2	P25098	689 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	GTF2A2	P52657	109 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	CDC16	Q13042	620 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	DCAF6	Q58WW2	860 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	TMCO4	Q5TGY1	634 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	RAPH1	Q70E73	1250 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	STRADA	Q7RTN6	431 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	CCNJL	Q8IV13	435 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	C16orf70	Q9BSU1	422 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	TUT1	Q9H6E5	874 aa	Known RBP	18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	EIF2B3	Q9NR50	452 aa	Known RBP	18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	DNAJB4	Q9UDY4	337 aa		18.2	■□□□□ 0.5
CDK16-223	ENST00000622098	GJD2	Q9UKL4	321 aa		18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms