RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 SCML4Q8N228 414 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 CARNMT1Q8N4J0 409 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.69□□□□□ -0.86
TARDBP-227ENST00000622057 WFDC5Q8TCV5 224 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 CEP192Q8TEP8 1941 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 IRGQQ8WZA9 623 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 HSFY1Q96LI6 401 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 HOOK1Q9UJC3 728 aaKnown RBP9.69□□□□□ -0.86
TARDBP-227ENST00000622057 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
TARDBP-227ENST00000622057 NCKAP1Q9Y2A7 1128 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 FNDC3AQ9Y2H6 1198 aaKnown RBP9.69□□□□□ -0.86
TARDBP-227ENST00000622057 PLXND1Q9Y4D7 1925 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 SNX11Q9Y5W9 270 aa9.69□□□□□ -0.86
TARDBP-227ENST00000622057 PCDH15Q96QU1 1955 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 USP24Q9UPU5 2620 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 TYW5A2RUC4 315 aaKnown RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 PSMA7O14818 248 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 MOCS2O96007 188 aaPredicted RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 AFF3P51826 1226 aaKnown RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ZBTB16Q05516 673 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 STILQ15468 1287 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 TEAD4Q15561 434 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 FAM133BQ5BKY9 247 aaKnown RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 MPP7Q5T2T1 576 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 NADSYN1Q6IA69 706 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 MSANTD2Q6P1R3 559 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 LRSAM1Q6UWE0 723 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 LAYNQ6UX15 382 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ADAT2Q7Z6V5 191 aaKnown RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 CCDC117Q8IWD4 279 aaPredicted RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 SCUBE3Q8IX30 993 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 CFAP52Q8N1V2 620 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ENGASEQ8NFI3 743 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 C1orf216Q8TAB5 229 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 FIBINQ8TAL6 211 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 SPATA20Q8TB22 786 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 FAM149B1Q96BN6 582 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 BIRC7Q96CA5 298 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 DHTKD1Q96HY7 919 aaPredicted RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 DDX50Q9BQ39 737 aaKnown RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ZSWIM1Q9BR11 485 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 GTPBP4Q9BZE4 634 aaKnown RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 SGK2Q9HBY8 427 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 TM9SF3Q9HD45 589 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ST7Q9NRC1 585 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 LHX6Q9UPM6 363 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 NAALADL1Q9UQQ1 740 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ANKRD6Q9Y2G4 727 aa9.68□□□□□ -0.86
TARDBP-227ENST00000622057 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.68□□□□□ -0.86
TARDBP-227ENST00000622057 CAPN9O14815 690 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 FLRT2O43155 660 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 IRAK2O43187 625 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 RNASEH1O60930 286 aaKnown RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 SIN3BO75182 1162 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 FBXO21O94952 628 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 IGLV3-27P01718 113 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 FYNP06241 537 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 ATXN1LP0C7T5 689 aaKnown RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 ZNF883P0CG24 379 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 KRT5P13647 590 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CD27P26842 260 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CSKP41240 450 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 NUMBP49757 651 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 STX17P56962 302 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 RPS24P62847 133 aaKnown RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 NUCB2P80303 420 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 TTC31Q49AM3 519 aaPredicted RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CCDC157Q569K6 752 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 FSCBQ5H9T9 825 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 ZNF776Q68DI1 518 aaPredicted RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 C19orf48Q6RUI8 117 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CCNI2Q6ZMN8 369 aaPredicted RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 DBX2Q6ZNG2 339 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 MMS22LQ6ZRQ5 1243 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 GLRX5Q86SX6 157 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 PROSER1Q86XN7 944 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 ARHGEF19Q8IW93 802 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 DHX40Q8IX18 779 aaKnown RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 ZNF557Q8N988 423 aaPredicted RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 LMO3Q8TAP4 145 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 DQX1Q8TE96 717 aaKnown RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 AZIN2Q96A70 460 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 TTC17Q96AE7 1141 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 MYEOVQ96EZ4 313 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CEP63Q96MT8 703 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 TIGD1Q96MW7 591 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 SERPINB11Q96P15 392 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CDC6Q99741 560 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 PCED1AQ9H1Q7 454 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 NEUROG2Q9H2A3 272 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 CCDC86Q9H6F5 360 aaKnown RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 FBRSQ9HAH7 460 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 FBXL12Q9NXK8 326 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 KIAA1522Q9P206 1035 aaPredicted RBP9.67□□□□□ -0.86
TARDBP-227ENST00000622057 MAN1B1Q9UKM7 699 aa9.67□□□□□ -0.86
TARDBP-227ENST00000622057 BTBD3Q9Y2F9 522 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms