RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 GRAP2O75791 330 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 GLI1P08151 1106 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 PABPC1P11940 636 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 CYP11B1P15538 503 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 STARD3Q14849 445 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 MS4A13Q5J8X5 152 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 EFHC1Q5JVL4 640 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 SPDYCQ5MJ68 293 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 OR6B2Q6IFH4 312 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 OLFML1Q6UWY5 402 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 KIAA1324Q6UXG2 1013 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 CFAP52Q8N1V2 620 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 HJURPQ8NCD3 748 aaPredicted RBP18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 WFIKKN2Q8TEU8 576 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 NOX5Q96PH1 765 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 PRDM16Q9HAZ2 1276 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 TMEM74BQ9NUR3 256 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 ASNSD1Q9NWL6 643 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 NCOR2Q9Y618 2525 aa18.62■□□□□ 0.57
SCAMP4-213ENST00000621748 SYNCRIPO60506 623 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 HSF2BPO75031 334 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 APOEP02649 317 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 EPHX1P07099 455 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 HLA-EP13747 358 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 KLK7P49862 253 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 LIMK1P53667 647 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 RPL6Q02878 288 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 ARID5AQ03989 594 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 E2F5Q15329 346 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 PTPRNQ16849 979 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 FILIP1LQ4L180 1135 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 STPG1Q5TH74 334 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 MBLAC2Q68D91 279 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 SERPINA13PQ6UXR4 307 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 SLC36A4Q6YBV0 504 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 AHI1Q8N157 1196 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 FIBINQ8TAL6 211 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 DDX1Q92499 740 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 STK33Q9BYT3 514 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 GANQ9H2C0 597 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 TMEM245Q9H330 911 aa18.61■□□□□ 0.57
SCAMP4-213ENST00000621748 MUC22E2RYF6 1773 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 SYNJ2BP-COX16A0A087WUM0 186 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 F8VZ95 297 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 AP5Z1O43299 807 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 ITPKAP23677 461 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 CDH5P33151 784 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 COPAP53621 1224 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 CDK17Q00537 523 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 SLC6A3Q01959 620 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 FSCBQ5H9T9 825 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 TAF3Q5VWG9 929 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 LYSMD4Q5XG99 296 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 RAP1GAP2Q684P5 730 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 NOP9Q86U38 636 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 TMPRSS6Q8IU80 811 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 MFN1Q8IWA4 741 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 ZNF366Q8N895 744 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 BTN2A3PQ96KV6 586 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 FAM204AQ9H8W3 233 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.6■□□□□ 0.576e-7■■■■□ 26.5
SCAMP4-213ENST00000621748 DDIT4Q9NX09 232 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 COX16Q9P0S2 106 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 PLA2G4CQ9UP65 541 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 CEP83Q9Y592 693 aa18.6■□□□□ 0.57
SCAMP4-213ENST00000621748 LNP1A1A4G5 178 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 FAM170AA1A519 330 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 KCNU1A8MYU2 1149 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 TM4SF5O14894 197 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 KHNYNO15037 678 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 SERPINC1P01008 464 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 TACR2P21452 398 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 SNX16P57768 344 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 IRX4P78413 519 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 ZNF33AQ06730 810 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 LMAN2Q12907 356 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 FNDC3BQ53EP0 1204 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 MMS22LQ6ZRQ5 1243 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 SLC26A9Q7LBE3 791 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 METTL3Q86U44 580 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 LUZP1Q86V48 1076 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 SYT12Q8IV01 421 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 SLC41A1Q8IVJ1 513 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 DHX40Q8IX18 779 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 LGI2Q8N0V4 545 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 CARNMT1Q8N4J0 409 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 ATP6V0D2Q8N8Y2 350 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 TMEM35BQ8NCS4 154 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 RNF214Q8ND24 703 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 SYNCQ9H7C4 482 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 ITM2CQ9NQX7 267 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 PILRBQ9UKJ0 227 aa18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 INTS6Q9UL03 887 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-213ENST00000621748 NUMA1Q14980 2115 aa18.58■□□□□ 0.57
SCAMP4-213ENST00000621748 ATXN2Q99700 1313 aaKnown RBP18.58■□□□□ 0.57
SCAMP4-213ENST00000621748 TYW5A2RUC4 315 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-213ENST00000621748 EPHB6O15197 1021 aa18.58■□□□□ 0.56
SCAMP4-213ENST00000621748 TPM3P06753 285 aa18.58■□□□□ 0.56
SCAMP4-213ENST00000621748 DLDP09622 509 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms