RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ZBTB24O43167 697 aaPredicted RBP10.85□□□□□ -0.67
VPS11-208ENST00000621676 CKMP06732 381 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 ACADSBP45954 432 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 FNTAP49354 379 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 TAP1Q03518 808 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 TWF1Q12792 350 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 STILQ15468 1287 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 PKN2Q16513 984 aaKnown RBP10.85□□□□□ -0.67
VPS11-208ENST00000621676 FAM219BQ5XKK7 198 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 CORO1BQ9BR76 489 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 SMYD2Q9NRG4 433 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 FEZ2Q9UHY8 353 aaPredicted RBP10.85□□□□□ -0.67
VPS11-208ENST00000621676 CELSR3Q9NYQ7 3312 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 A0A0D9SEW6 157 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 HIDE1A8MVS5 230 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 RASA4BC9J798 803 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 J3KR12 359 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 RASA4O43374 803 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 GABRB2P47870 512 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 CERCAMQ5T4B2 595 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 PDIK1LQ8N165 341 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 NUP93Q8N1F7 819 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 TMEM86AQ8N2M4 240 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 NAT16Q8N8M0 369 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 FAM71BQ8TC56 605 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 PRMT1Q99873 361 aaKnown RBP10.85□□□□□ -0.67
VPS11-208ENST00000621676 VN1R3Q9BXE9 311 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 CAPS2Q9BXY5 557 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 ENTPD7Q9NQZ7 604 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 BPTFQ12830 3046 aa10.85□□□□□ -0.67
VPS11-208ENST00000621676 MGAT1P26572 445 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 SNX16P57768 344 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 OASLQ15646 514 aaKnown RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 NECAB2Q7Z6G3 386 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 CCDC63Q8NA47 563 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 TFB1MQ8WVM0 346 aaKnown RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 NPY6RQ99463 290 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 RNF38Q9H0F5 515 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 EPB41L4BQ9H329 900 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 C11orf49Q9H6J7 331 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 HHLA1C9JL84 531 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 AXIN1O15169 862 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 EOMESO95936 686 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ERVK-10P10266 1014 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 DCP1BQ8IZD4 617 aaKnown RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 MICALL1Q8N3F8 863 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ZNF366Q8N895 744 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ATP11CQ8NB49 1132 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 KLHL23Q8NBE8 558 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 OR7D4Q8NG98 312 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 SLC35B2Q8TB61 432 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ART4Q93070 314 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 RPL10LQ96L21 214 aaKnown RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 PPP1R36Q96LQ0 422 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 C17orf80Q9BSJ5 609 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 KLC2Q9H0B6 622 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 WDR6Q9NNW5 1121 aaKnown RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 NT5MQ9NPB1 228 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 FAM8A1Q9UBU6 413 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 FZD10Q9ULW2 581 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 IKBKGQ9Y6K9 419 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 CBX4O00257 560 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 NRG2O14511 850 aaPredicted RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 NDUFAB1O14561 156 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 DNALI1O14645 258 aaPredicted RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 TRIM24O15164 1050 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 TLL1O43897 1013 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ARHGEF15O94989 841 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 HAPLN1P10915 354 aaPredicted RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 ATF6P18850 670 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ITIH2P19823 946 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 KLRC2P26717 231 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 GKP32189 559 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ACVRL1P37023 503 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 TBX4P57082 545 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 KBTBD12Q3ZCT8 623 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ANKRD20A2Q5SQ80 823 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 RNF187Q5TA31 235 aaPredicted RBP10.84□□□□□ -0.67
VPS11-208ENST00000621676 ANKRD20A1Q5TYW2 823 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ANKRD20A3Q5VUR7 823 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 LGI2Q8N0V4 545 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 HTR3CQ8WXA8 447 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 ATP6V1G3Q96LB4 118 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 TM6SF2Q9BZW4 377 aa10.84□□□□□ -0.67
VPS11-208ENST00000621676 CXorf49A8MYA2 514 aaPredicted RBP10.83□□□□□ -0.68
VPS11-208ENST00000621676 CXCL14O95715 111 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 AGTP01019 485 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 BRAFP15056 766 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 CHN1P15882 459 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 IRS1P35568 1242 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 HSPA9P38646 679 aaKnown RBP10.83□□□□□ -0.68
VPS11-208ENST00000621676 ZBTB17Q13105 803 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 CLSTN3Q9BQT9 956 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 SHCBP1LQ9BZQ2 653 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 CNGB3Q9NQW8 809 aa10.83□□□□□ -0.68
VPS11-208ENST00000621676 LRRC37A2A6NM11 1700 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms