RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 STIM2Q9P246 746 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 UVRAGQ9P2Y5 699 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 ANAPC7Q9UJX3 599 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 KAT7O95251 611 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 NDUFA10O95299 355 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 IPO7O95373 1038 aaKnown RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 EGFP01133 1207 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 APODP05090 189 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 CHRNB1P11230 501 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 HOXD9P28356 352 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 GGCXP38435 758 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 GRIA2P42262 883 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 DGKGP49619 791 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 RPS24P62847 133 aaKnown RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 ZNF252P-AS1Q0IIN9 211 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 DGKKQ5KSL6 1271 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 RABGAP1LQ5R372 815 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 ACBD5Q5T8D3 534 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 FBXL22Q6P050 247 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 CCDC185Q8N715 623 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 ZNF564Q8TBZ8 553 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 ANP32BQ92688 251 aaKnown RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 C1orf74Q96LT6 269 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 RPRD1AQ96P16 312 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 LRFN3Q9BTN0 628 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 LUC7LQ9NQ29 371 aaKnown RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 RBM12Q9NTZ6 932 aaKnown RBP19.21■□□□□ 0.67
CIRBP-245ENST00000621399 IP6K2Q9UHH9 426 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 INTUQ9ULD6 942 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 VANGL2Q9ULK5 521 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 PCDHA13Q9Y5I0 950 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 SNX10Q9Y5X0 201 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 F5P12259 2224 aa19.21■□□□□ 0.67
CIRBP-245ENST00000621399 TBC1D3BA6NDS4 549 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 MYO1FO00160 1098 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 TRIM24O15164 1050 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 CISD3P0C7P0 127 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 MESP2Q0VG99 397 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 FZD5Q13467 585 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 CCINQ13939 588 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 PIGHQ14442 188 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-245ENST00000621399 GSE1Q14687 1217 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 LRRC31Q6UY01 552 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 RAD9BQ6WBX8 426 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 NUDT18Q6ZVK8 323 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 SLFN11Q7Z7L1 901 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 C14orf80Q86SX3 495 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 TMEM139Q8IV31 216 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 CCDC117Q8IWD4 279 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-245ENST00000621399 NTAN1Q96AB6 310 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 CLDN23Q96B33 292 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 BTBD6Q96KE9 485 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 SLC2A11Q9BYW1 496 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 FBXO10Q9UK96 956 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 CLEC4EQ9ULY5 219 aa19.2■□□□□ 0.66
CIRBP-245ENST00000621399 SRGAP2O75044 1071 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 AVPR2P30518 371 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 ACAP1Q15027 740 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 TTC39BQ5VTQ0 682 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-245ENST00000621399 RHOT2Q8IXI1 618 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 PHTF2Q8N3S3 785 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 CARNMT1Q8N4J0 409 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 ARFGAP1Q8N6T3 406 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 TMEM105Q8N8V8 129 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 SLC35G2Q8TBE7 412 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 IGSF8Q969P0 613 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 NCAPGQ9BPX3 1015 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 PCSK1NQ9UHG2 260 aa19.19■□□□□ 0.66
CIRBP-245ENST00000621399 A0A0A0MRY4 1105 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 RPS9P46781 194 aaKnown RBP19.18■□□□□ 0.66
CIRBP-245ENST00000621399 AIF1P55008 147 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 FBXO43Q4G163 708 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 EFHC2Q5JST6 749 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 CIR1Q86X95 450 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-245ENST00000621399 MFN1Q8IWA4 741 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 SYNPOQ8N3V7 929 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 ZNF557Q8N988 423 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-245ENST00000621399 TERB1Q8NA31 727 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 EZH1Q92800 747 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-245ENST00000621399 OSBPL2Q9H1P3 480 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 OSGEPQ9NPF4 335 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 OR12D3Q9UGF7 316 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 LCMT1Q9UIC8 334 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 SLC27A6Q9Y2P4 619 aa19.18■□□□□ 0.66
CIRBP-245ENST00000621399 E9PAM4 449 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 H0Y626 953 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 K7EQS6 105 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 PRPSAP2O60256 369 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 LRCH4O75427 683 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 LUC7L3O95232 432 aaKnown RBP19.17■□□□□ 0.66
CIRBP-245ENST00000621399 MIPP30301 263 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 PCK1P35558 622 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 MAGEA9P43362 315 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 TNFRSF4P43489 277 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 SEC13P55735 322 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 SCAPQ12770 1279 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 CDH18Q13634 790 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 RNF43Q68DV7 783 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 SFTPA1Q8IWL2 248 aa19.17■□□□□ 0.66
CIRBP-245ENST00000621399 NIPA2Q8N8Q9 360 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms