RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 IFNA14P01570 189 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CCNG1P51959 295 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC20A2Q08357 652 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ILF2Q12905 390 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 POU6F1Q14863 301 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 PGS1Q32NB8 556 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ATAD3BQ5T9A4 648 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC47A2Q86VL8 602 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 UNC93AQ86WB7 457 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 DNAJC9Q8WXX5 260 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 REPS1Q96D71 796 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 CMTM5Q96DZ9 223 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 MAGED4Q96JG8 741 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 RIPOR3Q96MK2 946 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 POLR1EQ9GZS1 481 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 TMEM134Q9H6X4 195 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 RGS18Q9NS28 235 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 TMCC3Q9ULS5 477 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 PLAGL2Q9UPG8 496 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 ACOT9Q9Y305 439 aa10.02□□□□□ -0.81
CLTCL1-211ENST00000621271 IGF2BP3O00425 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 CDH8P55286 799 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 LAYNQ6UX15 382 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SPOCD1Q6ZMY3 1216 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TTC7BQ86TV6 843 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 CYP4Z1Q86W10 505 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 LONP2Q86WA8 852 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 PXDNQ92626 1479 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 CERS4Q9HA82 394 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 DCDC2Q9UHG0 476 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TRHDEQ9UKU6 1024 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TNFSF13BQ9Y275 285 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 GPSM3Q9Y4H4 160 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 A8MX80 341 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 CCNT2O60583 730 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ERN1O75460 977 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SKAP2O75563 359 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SASH3O75995 380 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 CPSF4O95639 269 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 KRT8P05787 483 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 MMP13P45452 471 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 RPS7P62081 194 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 STRA8Q7Z7C7 330 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 HJURPQ8NCD3 748 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TPCN2Q8NHX9 752 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ERP27Q96DN0 273 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 KAZALD1Q96I82 304 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TTPALQ9BTX7 342 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SAE1Q9UBE0 346 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TFR2Q9UP52 801 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ERI2A8K979 691 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SCAMP3O14828 347 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 RAD51BO15315 384 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 RARGP13631 454 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 GPR1P46091 355 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SMAD3P84022 425 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC6A3Q01959 620 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 CHI3L2Q15782 390 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 DUSP28Q4G0W2 176 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 RAET1GQ6H3X3 334 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 METTL3Q86U44 580 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TATDN2Q93075 761 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 MKL1Q969V6 931 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 RPRD1BQ9NQG5 326 aaKnown RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 SYBUQ9NX95 663 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 HES2Q9Y543 173 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 RIC1Q4ADV7 1423 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 OR6C75A6NL08 312 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ZBTB14O43829 449 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 PRMT3O60678 531 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 APODP05090 189 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ASGR1P07306 291 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ENO2P09104 434 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 GABRR2P28476 465 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 RRM2P31350 389 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 MPP3Q13368 585 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 DNAL1Q4LDG9 190 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TREML2Q5T2D2 321 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ZNF544Q6NX49 715 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TMEM154Q6P9G4 183 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 P3H2Q8IVL5 708 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 NLGN2Q8NFZ4 835 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ARNTL2Q8WYA1 636 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 PPP1R14AQ96A00 147 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ZBTB45Q96K62 511 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 ACOX2Q99424 681 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TUBGCP4Q9UGJ1 667 aa10.01□□□□□ -0.81
CLTCL1-211ENST00000621271 TMEM120BA0PK00 339 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 SNTNA6NMZ2 147 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 C16orf96A6NNT2 1141 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 TMEM114B3SHH9 223 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 NT5C1B-RDH14C9J2C7 533 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 CYTH3O43739 400 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 HS6ST1O60243 411 aa10□□□□□ -0.81
CLTCL1-211ENST00000621271 CYP3A4P08684 503 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms