RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CD163L1Q9NR16 1453 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 AFF2P51816 1311 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 SPATA31A1Q5TZJ5 1347 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.85□□□□□ -1.47
VPS29-212ENST00000621131 TMEM225BP0DP42 221 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 TNNT2P45379 298 aaPredicted RBP5.85□□□□□ -1.47
VPS29-212ENST00000621131 POLGP54098 1239 aaPredicted RBP5.85□□□□□ -1.47
VPS29-212ENST00000621131 YPEL5P62699 121 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 ID2Q02363 134 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 DNASE1L3Q13609 305 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 ZNF517Q6ZMY9 492 aaPredicted RBP5.85□□□□□ -1.47
VPS29-212ENST00000621131 C16orf71Q8IYS4 520 aaPredicted RBP5.85□□□□□ -1.47
VPS29-212ENST00000621131 SUN3Q8TAQ9 357 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 WIPF2Q8TF74 440 aaPredicted RBP5.85□□□□□ -1.47
VPS29-212ENST00000621131 PHKBQ93100 1093 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 COG3Q96JB2 828 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 KRTAP1-5Q9BYS1 174 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 ZCWPW1Q9H0M4 648 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 PCDHGB6Q9Y5F9 930 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 NALCNQ8IZF0 1738 aa5.85□□□□□ -1.47
VPS29-212ENST00000621131 NRKQ7Z2Y5 1582 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 CPSF1Q10570 1443 aaKnown RBP5.84□□□□□ -1.47
VPS29-212ENST00000621131 TTC21AQ8NDW8 1320 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 IKBKBO14920 756 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 INSIG1O15503 277 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 ANXA2P07355 339 aaKnown RBP5.84□□□□□ -1.47
VPS29-212ENST00000621131 CYP19A1P11511 503 aaPredicted RBP5.84□□□□□ -1.47
VPS29-212ENST00000621131 LINC00205P59089 165 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 RPS13P62277 151 aaKnown RBP5.84□□□□□ -1.47
VPS29-212ENST00000621131 TXNL4AP83876 142 aaKnown RBP5.84□□□□□ -1.47
VPS29-212ENST00000621131 HSF1Q00613 529 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 ACOX1Q15067 660 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 LEXMQ3ZCV2 418 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 PPP4R4Q6NUP7 873 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 RNF44Q7L0R7 432 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS29-212ENST00000621131 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS29-212ENST00000621131 MBD3L2Q8NHZ7 208 aaPredicted RBP5.84□□□□□ -1.47
VPS29-212ENST00000621131 UNKQ9C0B0 810 aaKnown RBP5.84□□□□□ -1.47
VPS29-212ENST00000621131 NUP62CLQ9H1M0 184 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 HEY2Q9UBP5 337 aa5.84□□□□□ -1.47
VPS29-212ENST00000621131 ADGRL3Q9HAR2 1447 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 MAPK8IP3Q9UPT6 1336 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 KIF1AQ12756 1690 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 C16orf96A6NNT2 1141 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 WDR47O94967 919 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 GALNSP34059 522 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 CCDC15Q0P6D6 951 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 PFKFB3Q16875 520 aaPredicted RBP5.83□□□□□ -1.48
VPS29-212ENST00000621131 FAM110CQ1W6H9 321 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 EARS2Q5JPH6 523 aaKnown RBP5.83□□□□□ -1.48
VPS29-212ENST00000621131 KRT28Q7Z3Y7 464 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 KRT78Q8N1N4 520 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 CINPQ9BW66 212 aaPredicted RBP5.83□□□□□ -1.48
VPS29-212ENST00000621131 FOXP1Q9H334 677 aaPredicted RBP5.83□□□□□ -1.48
VPS29-212ENST00000621131 SAP30LQ9HAJ7 183 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 AGO4Q9HCK5 861 aaKnown RBP5.83□□□□□ -1.48
VPS29-212ENST00000621131 MLXIPLQ9NP71 852 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 PRDM11Q9NQV5 511 aa5.83□□□□□ -1.48
VPS29-212ENST00000621131 USP6P35125 1406 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 ACEP12821 1306 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 A0A087WZ62 844 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 MYMKA6NI61 221 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 RRHO14718 337 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 TMIGD3P0DMS9 266 aaPredicted RBP5.82□□□□□ -1.48
VPS29-212ENST00000621131 TACR3P29371 465 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 STIM1Q13586 685 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 SLC9C1Q4G0N8 1177 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 AASDHQ4L235 1098 aaPredicted RBP5.82□□□□□ -1.48
VPS29-212ENST00000621131 SAMD14Q8IZD0 417 aaPredicted RBP5.82□□□□□ -1.48
VPS29-212ENST00000621131 FSTL5Q8N475 847 aaPredicted RBP5.82□□□□□ -1.48
VPS29-212ENST00000621131 ZFYVE19Q96K21 471 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 APOL5Q9BWW9 433 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 TM2D2Q9BX73 214 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 ADGRE3Q9BY15 652 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 NUAK2Q9H093 628 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 SLC25A32Q9H2D1 315 aa5.82□□□□□ -1.48
VPS29-212ENST00000621131 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.81□□□□□ -1.48
VPS29-212ENST00000621131 AREL1O15033 823 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 CBFA2T3O75081 653 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 SNHG28P0DPA3 235 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 ATICP31939 592 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 JAK3P52333 1124 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 DAG1Q14118 895 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 KCNJ12Q14500 433 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 KPNB1Q14974 876 aaKnown RBP5.81□□□□□ -1.48
VPS29-212ENST00000621131 RRAGBQ5VZM2 374 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 ANKRD13BQ86YJ7 626 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 ZDHHC17Q8IUH5 632 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.81□□□□□ -1.48
VPS29-212ENST00000621131 ZNF548Q8NEK5 533 aaPredicted RBP5.81□□□□□ -1.48
VPS29-212ENST00000621131 NSMCE1Q8WV22 266 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 P2RY11Q96G91 374 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 EBF3Q9H4W6 596 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 DDX21Q9NR30 783 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS29-212ENST00000621131 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.81□□□□□ -1.48
VPS29-212ENST00000621131 USP54Q70EL1 1684 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 NCOA3Q9Y6Q9 1424 aa5.81□□□□□ -1.48
VPS29-212ENST00000621131 MAP2P11137 1827 aaKnown RBP5.81□□□□□ -1.48
VPS29-212ENST00000621131 RGPD8O14715 1765 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms