RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 CNTN5O94779 1100 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 SLC34A2O95436 690 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 RARAP10276 462 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 ADH5P11766 374 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 DESP17661 470 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 GJA4P35212 333 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 CHKAP35790 457 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 SLC6A11P48066 632 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 SCAPQ12770 1279 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 SLC44A4Q53GD3 710 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 EFHC2Q5JST6 749 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 ERMARDQ5T6L9 678 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 FYB2Q5VWT5 728 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 C17orf53Q8N3J3 647 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 DDI1Q8WTU0 396 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 TMA16Q96EY4 203 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 HAPLN3Q96S86 360 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 BBS2Q9BXC9 721 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 OSBPL2Q9H1P3 480 aa11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 DHX35Q9H5Z1 703 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-221ENST00000621093 KRBA1A5PL33 1030 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 ANTXRLA6NF34 631 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 E9PAM4 449 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 KRT86O43790 486 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 SPOPO43791 374 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 CD48P09326 243 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 TYRP14679 529 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 CD72P21854 359 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 L1CAMP32004 1257 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 OPRD1P41143 372 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 MARCKSL1P49006 195 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 ZXDAP98168 799 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 GAD2Q05329 585 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 MESP2Q0VG99 397 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 SEMA3BQ13214 749 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 MPPE1Q53F39 396 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 ALFQ53S48 1182 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 C11orf63Q6NUN7 778 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 TXNDC11Q6PKC3 985 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 ZNF662Q6ZS27 426 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 DAAM2Q86T65 1068 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 TXLNBQ8N3L3 684 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 C1orf74Q96LT6 269 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 RPRD1AQ96P16 312 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 DDX50Q9BQ39 737 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 OR12D3Q9UGF7 316 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 NEU3Q9UQ49 428 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 PIAS3Q9Y6X2 628 aa11.29□□□□□ -0.6
POLR2J3-221ENST00000621093 SHROOM3Q8TF72 1996 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 DRGXA6NNA5 263 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 SPECC1L-ADORA2AF8WAN1 911 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 PI4K2BG5E9Z4 385 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 HOXC11O43248 304 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 CREB3O43889 395 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 LRIG2O94898 1065 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 FTCDO95954 541 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 ADH1CP00326 375 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 PENKP01210 267 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 CYBBP04839 570 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 CTHP32929 405 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 NUMBP49757 651 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 ARSEP51690 589 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 AIF1P55008 147 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 PFKPQ01813 784 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 KDSRQ06136 332 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 NR1H3Q13133 447 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 HADHQ16836 314 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 C5orf22Q49AR2 442 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 PPP6R3Q5H9R7 873 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 MANEALQ5VSG8 457 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 TPRG1Q6ZUI0 275 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 SFTPA1Q8IWL2 248 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 HJURPQ8NCD3 748 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 KIAA1524Q8TCG1 905 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 KRT35Q92764 455 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 CD101Q93033 1021 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 FBRSL1Q9HCM7 1045 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 TMEM51Q9NW97 253 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
POLR2J3-221ENST00000621093 FBXL21Q9UKT6 434 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms