RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 EPC2Q52LR7 807 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 INTS11Q5TA45 600 aaKnown RBP7.33□□□□□ -1.24
COLCA1-205ENST00000620864 DGLUCYQ7Z3D6 616 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 FAM220AQ7Z4H9 259 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 POC5Q8NA72 575 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 FAM172AQ8WUF8 416 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 ZC3H10Q96K80 434 aaKnown RBP7.33□□□□□ -1.24
COLCA1-205ENST00000620864 CAPNS2Q96L46 248 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 SCUBE2Q9NQ36 999 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 KCNK4Q9NYG8 393 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 RPS6KA6Q9UK32 745 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.33□□□□□ -1.24
COLCA1-205ENST00000620864 UTYO14607 1347 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 EMSYQ7Z589 1322 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 SNAP23O00161 211 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 REM1O75628 298 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 GARTP22102 1010 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 PTPN7P35236 360 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 GSTM5P46439 218 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 GALCP54803 685 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 AQP5P55064 265 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 TNK2Q07912 1038 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 ZC2HC1CQ53FD0 456 aaPredicted RBP7.33□□□□□ -1.24
COLCA1-205ENST00000620864 PPP2R2DQ66LE6 453 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 FAM92BQ6ZTR7 304 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 FAM228AQ86W67 206 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 KLRG1Q96E93 195 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 ATXN7L3BQ96GX2 97 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 NEUROD4Q9HD90 331 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 KLHL11Q9NVR0 708 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF222Q9UK12 451 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 PCDHB11Q9Y5F2 797 aa7.33□□□□□ -1.24
COLCA1-205ENST00000620864 KPNA3O00505 521 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 DGKIO75912 1065 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 APOL3O95236 402 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF682O95780 498 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SERPINE1P05121 402 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 VCLP18206 1134 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MYL6P60660 151 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 KCNMA1Q12791 1236 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 GRIK3Q13003 919 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 NME3Q13232 169 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 CTU1Q7Z7A3 348 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 DEFB107AQ8IZN7 70 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MAGEC3Q8TD91 643 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SGF29Q96ES7 293 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 FAM118BQ9BPY3 351 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 LRRC40Q9H9A6 602 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SH3BP1Q9Y3L3 701 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 GPC6Q9Y625 555 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 USP27XA6NNY8 438 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 NOS1APO75052 506 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 PGK1P00558 417 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 NR4A1P22736 598 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 GTF2E2P29084 291 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 GRK4P32298 578 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 CDH4P55283 916 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 NEDD8Q15843 81 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MTDHQ86UE4 582 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 C1orf131Q8NDD1 294 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 FAM111AQ96PZ2 611 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 FAM213AQ9BRX8 229 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 TMEM138Q9NPI0 162 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 DDX20Q9UHI6 824 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 TBC1D30Q9Y2I9 924 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 RRP8O43159 456 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ZW10O43264 779 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 UBOX5O94941 541 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 EYA4O95677 639 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 RPN2P04844 631 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MYL9P24844 172 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SKP1P63208 163 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 FRG1Q14331 258 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ARHGAP15Q53QZ3 475 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 DEFB128Q7Z7B8 93 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MS4A14Q96JA4 679 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 C9orf72Q96LT7 481 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF112Q9UJU3 913 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SLC39A10Q9ULF5 831 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 RUVBL2Q9Y230 463 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MFHAS1Q9Y4C4 1052 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 G3V2T6 193 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ALADP13716 330 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ITIH1P19827 911 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 TGM2P21980 687 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 GCLCP48506 637 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 RBP5P82980 135 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 AAGABQ6PD74 315 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 CHCHD4Q8N4Q1 142 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF668Q96K58 619 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 AGO2Q9UKV8 859 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ERGIC3Q9Y282 383 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 NDUFAF1Q9Y375 327 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SMIM22K7EJ46 135 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 IRF1P10914 325 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 NOS3P29474 1203 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 EPHA10Q5JZY3 1008 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SLC7A14Q8TBB6 771 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 HDAC7Q8WUI4 952 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms