RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 NDE1Q9NXR1 346 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 A0A088AWK7 358 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 PLIN3O60664 434 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 SMIM24O75264 130 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 GRAP2O75791 330 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 KLHL2O95198 593 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 MYL4P12829 197 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 FDFT1P37268 417 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 ALDH18A1P54886 795 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 RBP5P82980 135 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 ROR2Q01974 943 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 KDSRQ06136 332 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 MDH1BQ5I0G3 518 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 MROH9Q5TGP6 573 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 FOXB2Q5VYV0 432 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 CWF19L1Q69YN2 538 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 EFCAB12Q6NXP0 572 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 SCYL2Q6P3W7 929 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 TTC30AQ86WT1 665 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 WDR75Q8IWA0 830 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 GALNT15Q8N3T1 639 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 LINC01465Q8N7H1 131 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 PHC3Q8NDX5 983 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 PIWIL2Q8TC59 973 aaKnown RBP13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 CENPIQ92674 756 aaPredicted RBP13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 CLPTM1LQ96KA5 538 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 OLFM3Q96PB7 478 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 UNC93B1Q9H1C4 597 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 SMARCAD1Q9H4L7 1026 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 DNAJC28Q9NX36 388 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 ZDHHC7Q9NXF8 308 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 MARCOQ9UEW3 520 aaPredicted RBP13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 MAD1L1Q9Y6D9 718 aa13.31□□□□□ -0.28
CLTCL1-210ENST00000617926 DNAJC25-GNG10A0A024R161 153 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 HACD1B0YJ81 288 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PIK3R2O00459 728 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 NOP56O00567 594 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 SERPINE1P05121 402 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 KITP10721 976 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PIM1P11309 404 aaPredicted RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 GNAT1P11488 350 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 CCL5P13501 91 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PAPOLAP51003 745 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 GBE1Q04446 702 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 SLC10A2Q12908 348 aaPredicted RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 UBAP2LQ14157 1087 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 KCTD2Q14681 263 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PCLAFQ15004 111 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 INSCQ1MX18 579 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 MAP3K21Q5TCX8 1036 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PMF1Q6P1K2 205 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 DPP9Q86TI2 863 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 SLC35F5Q8WV83 523 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 TRIM56Q9BRZ2 755 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PRDM16Q9HAZ2 1276 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 MTMR10Q9NXD2 777 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 HESX1Q9UBX0 185 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PPM1HQ9ULR3 514 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 DNAJC16Q9Y2G8 782 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 USP3Q9Y6I4 520 aa13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 PDCD11Q14690 1871 aaKnown RBP13.3□□□□□ -0.28
CLTCL1-210ENST00000617926 A0A0A0MRY4 1105 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 PAPSS1O43252 624 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 GABBR2O75899 941 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 DGKIO75912 1065 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 TOP3BO95985 862 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 PRKCGP05129 697 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 LYNP07948 512 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 C6orf222P0C671 652 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 RGS7P49802 495 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 SNX16P57768 344 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 SARNPP82979 210 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 CACNB2Q08289 660 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 CDC16Q13042 620 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 ZNF792Q3KQV3 632 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 N4BP2L1Q5TBK1 243 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 RNF220Q5VTB9 566 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 C1orf146Q5VVC0 180 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 PGM2L1Q6PCE3 622 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 IZUMO2Q6UXV1 221 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 PACS1Q6VY07 963 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 ZCCHC23Q6ZST2 131 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 CCNJLQ8IV13 435 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 HACE1Q8IYU2 909 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 JADE3Q92613 823 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 PPP2R3CQ969Q6 453 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 MAML3Q96JK9 1138 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 SPATA13Q96N96 652 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 RILPQ96NA2 401 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 S100A14Q9HCY8 104 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 XPNPEP3Q9NQH7 507 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 PAPOLBQ9NRJ5 636 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 DPP3Q9NY33 737 aa13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 TNRC18O15417 2968 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-210ENST00000617926 ITM2AO43736 263 aa13.28□□□□□ -0.28
CLTCL1-210ENST00000617926 MAP3K6O95382 1288 aa13.28□□□□□ -0.28
CLTCL1-210ENST00000617926 PROCP04070 461 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms