RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ARID5AQ03989 594 aa23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 DPCR1Q3MIW9 517 aa23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 FNDC3BQ53EP0 1204 aaKnown RBP23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 HJURPQ8NCD3 748 aaPredicted RBP23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 OR2T3Q8NH03 318 aa23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 GTPBP2Q9BX10 602 aaKnown RBP23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 GPR174Q9BXC1 333 aa23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 ANGPTL2Q9UKU9 493 aa23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 INTS6Q9UL03 887 aaKnown RBP23.06■■□□□ 1.28
NEDD4L-237ENST00000617539 USP24Q9UPU5 2620 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 DLDP09622 509 aaKnown RBP23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 CEACAM1P13688 526 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 MTIF2P46199 727 aaKnown RBP23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 GFPT1Q06210 699 aaPredicted RBP23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 ZNF252P-AS1Q0IIN9 211 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 EIF4EBP2Q13542 120 aaPredicted RBP23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 MS4A13Q5J8X5 152 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 DPY19L2P1Q6NXN4 242 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 RABEPKQ7Z6M1 372 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 MFN1Q8IWA4 741 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 CFAP52Q8N1V2 620 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 DEFB124Q8NES8 71 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 FIBINQ8TAL6 211 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 DNASE2BQ8WZ79 361 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 FOXJ1Q92949 421 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 MYO19Q96H55 970 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 FAM81BQ96LP2 452 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 CPXM1Q96SM3 734 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 POPDC2Q9HBU9 364 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 PLA2G4CQ9UP65 541 aa23.05■■□□□ 1.28
NEDD4L-237ENST00000617539 AKAP13Q12802 2813 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 ARHGAP33O14559 1287 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 MOCS2O96007 188 aaPredicted RBP23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 PNMA6AP0CW24 399 aaPredicted RBP23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 YWHAZP63104 245 aaKnown RBP23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 SEMA3BQ13214 749 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 ZC3H12AQ5D1E8 599 aaKnown RBP23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 FSCBQ5H9T9 825 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 PIP4P1Q86T03 277 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 PASD1Q8IV76 773 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 RGL4Q8IZJ4 473 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 MINDY1Q8N5J2 469 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 CADM4Q8NFZ8 388 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 THAP9Q9H5L6 903 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 PRSS16Q9NQE7 514 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 WASF3Q9UPY6 502 aa23.04■■□□□ 1.28
NEDD4L-237ENST00000617539 CAPN9O14815 690 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 TRUB2O95900 331 aaKnown RBP23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 DCAF6Q58WW2 860 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 MIIPQ5JXC2 388 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 SYCP2LQ5T4T6 812 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 MMS22LQ6ZRQ5 1243 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 TTC17Q96AE7 1141 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 DDX50Q9BQ39 737 aaKnown RBP23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 TRIM62Q9BVG3 475 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 MTG2Q9H4K7 406 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 PCDHGC3Q9UN70 934 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 PCNX2A6NKB5 2137 aa23.03■■□□□ 1.28
NEDD4L-237ENST00000617539 SPEGQ15772 3267 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 ATP5BP06576 529 aaKnown RBP23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 ACADMP11310 421 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 POLR2EP19388 210 aaKnown RBP23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 OXTRP30559 389 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 CSKP41240 450 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 MAN2A1Q16706 1144 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 PLEKHG6Q3KR16 790 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 HSP90AA4PQ58FG1 418 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 WDR45BQ5MNZ6 344 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 RAP1GAP2Q684P5 730 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 FAM124AQ86V42 546 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 CARNMT1Q8N4J0 409 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 MRGPRX3Q96LB0 322 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 SLC2A13Q96QE2 648 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 NUP58Q9BVL2 599 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 DNAJC12Q9UKB3 198 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 NFE2L3Q9Y4A8 694 aa23.02■■□□□ 1.28
NEDD4L-237ENST00000617539 CACNA1BQ00975 2339 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 METTL12A8MUP2 240 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 MEI4A8MW99 385 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 UPK3BL1B0FP48 263 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 UPK3BL2E5RIL1 263 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 FOXN3O00409 490 aaPredicted RBP23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 GJB3O75712 270 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 LUC7L3O95232 432 aaKnown RBP23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 CLCN1P35523 988 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 RPS14P62263 151 aaKnown RBP23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 DCAF12L1Q5VU92 463 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 SLC47A2Q86VL8 602 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 LGI2Q8N0V4 545 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 ZNF557Q8N988 423 aaPredicted RBP23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 C1orf131Q8NDD1 294 aaKnown RBP23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 PPP1R13BQ96KQ4 1090 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 PRMT1Q99873 361 aaKnown RBP23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 LHX5Q9H2C1 402 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 DNAAF2Q9NVR5 837 aaKnown RBP23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 SUSD2Q9UGT4 822 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 SLCO1B1Q9Y6L6 691 aa23.01■■□□□ 1.27
NEDD4L-237ENST00000617539 ASPMQ8IZT6 3477 aa23■■□□□ 1.27
NEDD4L-237ENST00000617539 TOP3BO95985 862 aaKnown RBP23■■□□□ 1.27
NEDD4L-237ENST00000617539 APOEP02649 317 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms