RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 FAM72BQ86X60 149 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 PSTKQ8IV42 348 aaKnown RBP16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 CFAP52Q8N1V2 620 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 DDI1Q8WTU0 396 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 TEKT4Q8WW24 435 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 IGSF8Q969P0 613 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 P2RY11Q96G91 374 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 RPRD1AQ96P16 312 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 KCTD15Q96SI1 283 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 UHRF1Q96T88 793 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 IRX2Q9BZI1 471 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 PLK2Q9NYY3 685 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 STIM2Q9P246 746 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 AMFRQ9UKV5 643 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 DUSP12Q9UNI6 340 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 C5orf42Q9H799 3197 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 E9PAM4 449 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 CREB3O43889 395 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 TBL1XO60907 577 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 FTCDO95954 541 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 KRT7P08729 469 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 ADH5P11766 374 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 L1CAMP32004 1257 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 RPS24P62847 133 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 PFKPQ01813 784 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 NRG1Q02297 640 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 GAD2Q05329 585 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 LRRC38Q5VT99 294 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 FYB2Q5VWT5 728 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 NT5DC3Q86UY8 548 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 RHOT1Q8IXI2 618 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZNF683Q8IZ20 524 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 C17orf53Q8N3J3 647 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 PRICKLE1Q96MT3 831 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 BBS2Q9BXC9 721 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 TRPV5Q9NQA5 729 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 SLC2A4RGQ9NR83 387 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 KLHL11Q9NVR0 708 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 MUTYHQ9UIF7 546 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 MYO10Q9HD67 2058 aa16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 HELZP42694 1942 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-204ENST00000617222 DRGXA6NNA5 263 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 NEDD8-MDP1E9PL57 170 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 LRIG2O94898 1065 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 SOX9P48436 509 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 IRAK1P51617 712 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 CDH6P55285 790 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 PPP6R3Q5H9R7 873 aaPredicted RBP16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 RABGAP1LQ5R372 815 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 IER5LQ5T953 404 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 RWDD4Q6NW29 188 aaKnown RBP16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 POLNQ7Z5Q5 900 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 NAT16Q8N8M0 369 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 KCTD6Q8NC69 237 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 HJURPQ8NCD3 748 aaPredicted RBP16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 DNASE1L2Q92874 299 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 CD101Q93033 1021 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 ALS2CR12Q96Q35 445 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 EPAS1Q99814 870 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 MPP6Q9NZW5 540 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 MARK1Q9P0L2 795 aa16.12■□□□□ 0.17
PCDHGC3-204ENST00000617222 TYW5A2RUC4 315 aaKnown RBP16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 GOLGA6L9A6NEM1 432 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 EEF2KO00418 725 aaKnown RBP16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 HOXC11O43248 304 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 PSTPIP1O43586 416 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 CNTN5O94779 1100 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 PENKP01210 267 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 TYRP14679 529 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 GJA4P35212 333 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 SEMA3BQ13214 749 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 KRT81Q14533 505 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 DPYSL2Q16555 572 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 GAB4Q2WGN9 574 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 C5orf22Q49AR2 442 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 SLC44A4Q53GD3 710 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 ALFQ53S48 1182 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 ARTNQ5T4W7 220 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 MANEALQ5VSG8 457 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 CIR1Q86X95 450 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 TRIM58Q8NG06 486 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 RAPGEF5Q92565 580 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 KRT35Q92764 455 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 TBC1D31Q96DN5 1066 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 PCDH18Q9HCL0 1135 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 HEBP1Q9NRV9 189 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 KCND1Q9NSA2 647 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 CLEC4EQ9ULY5 219 aa16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 PACSIN2Q9UNF0 486 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-204ENST00000617222 IGLV3-10A0A075B6K4 115 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 PI4K2BG5E9Z4 385 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 KIF5CO60282 957 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 KRT1P04264 644 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 CD48P09326 243 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 CTNNA2P26232 953 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 HOXD9P28356 352 aaPredicted RBP16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 EPHB2P29323 1055 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms