RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NUAK2Q9H093 628 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 STN1Q9H668 368 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 NCANO14594 1321 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CDC42BPAQ5VT25 1732 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TMEM114B3SHH9 223 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 KATNA1O75449 491 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 SERPINA6P08185 405 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ALOX15P16050 662 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CSE1LP55060 971 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ITGA1P56199 1179 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 MAD2L1Q13257 205 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 BLMHQ13867 455 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CBWD6Q4V339 395 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CBWD3Q5JTY5 395 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CBWD5Q5RIA9 395 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ANKS6Q68DC2 871 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TMEM139Q8IV31 216 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ASB2Q96Q27 587 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 UNKQ9C0B0 810 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 HDHD2Q9H0R4 259 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 MID1IP1Q9NPA3 183 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 UBP1Q9NZI7 540 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 DMTF1Q9Y222 760 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 KLHL20Q9Y2M5 609 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TMA7Q9Y2S6 64 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TCRBV5S4A2TA0A5A2 114 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 RGSL1A5PLK6 1076 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 DPYSL4O14531 572 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 KLRC4O43908 158 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 LCA5LO95447 670 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CPSF4O95639 269 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 SLC2A4P14672 509 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 POU6F1Q14863 301 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 POLD3Q15054 466 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 AMER2Q8N7J2 671 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 FNDC5Q8NAU1 212 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 MAGEE2Q8TD90 523 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 RPRD1AQ96P16 312 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 OSBPL11Q9BXB4 747 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 SPATA16Q9BXB7 569 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 PHACTR1Q9C0D0 580 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 SERHL2Q9H4I8 314 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 SERHLQ9NQF3 203 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 IPPQ9Y573 584 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 AP4B1Q9Y6B7 739 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TARBP1Q13395 1621 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 RAD51BO15315 384 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CRTAMO95727 393 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ANXA6P08133 673 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 UQCRBP14927 111 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CDH3P22223 829 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 DNAJB2P25686 324 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ADSSP30520 456 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ALDH6A1Q02252 535 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 OLFML1Q6UWY5 402 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF554Q86TJ5 538 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 SLC44A2Q8IWA5 706 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 RIBC2Q9H4K1 309 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ELOVL6Q9H5J4 265 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 TBC1D13Q9NVG8 400 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 TUBA8Q9NY65 449 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CHADO15335 359 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 TADA2AO75478 443 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 FBXO21O94952 628 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 TCF7P36402 384 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 PBX1P40424 430 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 DGCR6Q14129 220 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 NDUFA5Q16718 116 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 PERM1Q5SV97 790 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 KLHL17Q6TDP4 642 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 PTAR1Q7Z6K3 402 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 TRABD2AQ86V40 505 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 FBXO39Q8N4B4 442 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ACTRT2Q8TDY3 377 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CLPBQ9H078 707 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 TAS2R14Q9NYV8 317 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 UBA2Q9UBT2 640 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF70Q9UC06 446 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 EFCAB10A6NFE3 127 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 MGAT4DA6NG13 374 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 SYNCRIPO60506 623 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 SNAP91O60641 907 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 KRT6AP02538 564 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CHI3L1P36222 383 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 HARS2P49590 506 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 BNIP1Q12981 228 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CDC16Q13042 620 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 DGKKQ5KSL6 1271 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 LRRC38Q5VT99 294 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 NECAB2Q7Z6G3 386 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 CHST13Q8NET6 341 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 SPPL2AQ8TCT8 520 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 SEMA4DQ92854 862 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 PTCD3Q96EY7 689 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ACSS3Q9H6R3 686 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 ACTR8Q9H981 624 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 TRHDEQ9UKU6 1024 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms