RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
UBXN1-218ENST00000616865 PPP1R9BQ96SB3 815 aa15.48■□□□□ 0.07
UBXN1-218ENST00000616865 NUSAP1Q9BXS6 441 aaKnown RBP15.48■□□□□ 0.07
UBXN1-218ENST00000616865 ULBP1Q9BZM6 244 aa15.48■□□□□ 0.07
UBXN1-218ENST00000616865 ZDHHC4Q9NPG8 344 aa15.48■□□□□ 0.07
UBXN1-218ENST00000616865 TMEM74BQ9NUR3 256 aa15.48■□□□□ 0.07
UBXN1-218ENST00000616865 MBD1Q9UIS9 605 aaPredicted RBP15.48■□□□□ 0.07
UBXN1-218ENST00000616865 NAGPAQ9UK23 515 aa15.48■□□□□ 0.07
UBXN1-218ENST00000616865 STRIP2Q9ULQ0 834 aa15.48■□□□□ 0.07
UBXN1-218ENST00000616865 ATXN2Q99700 1313 aaKnown RBP15.47■□□□□ 0.07
UBXN1-218ENST00000616865 E2F8A0AVK6 867 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 GOLGA8SH3BPF8 625 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 MAP3K13O43283 966 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 COCHO43405 550 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 DPP6P42658 865 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 TNFRSF4P43489 277 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 GAD2Q05329 585 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
UBXN1-218ENST00000616865 RAB41Q5JT25 222 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 SPDYCQ5MJ68 293 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 LY6G5CQ5SRR4 150 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 C10orf76Q5T2E6 689 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 PEAR1Q5VY43 1037 aaPredicted RBP15.47■□□□□ 0.07
UBXN1-218ENST00000616865 LYSMD4Q5XG99 296 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 TOGARAM2Q6ZUX3 1019 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 TMEM110Q86TL2 294 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 PHF13Q86YI8 300 aaPredicted RBP15.47■□□□□ 0.07
UBXN1-218ENST00000616865 SYT12Q8IV01 421 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 SCUBE3Q8IX30 993 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 ETFBKMTQ8IXQ9 262 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 ARHGAP18Q8N392 663 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 HMGB4Q8WW32 186 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 OTUB2Q96DC9 234 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 CNGB3Q9NQW8 809 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 TAS2R14Q9NYV8 317 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 SCML2Q9UQR0 700 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 EPN1Q9Y6I3 576 aaPredicted RBP15.47■□□□□ 0.07
UBXN1-218ENST00000616865 PCDH15Q96QU1 1955 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 ADAMTS9Q9P2N4 1935 aa15.47■□□□□ 0.07
UBXN1-218ENST00000616865 TMEM8BA6NDV4 472 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 EIF3CLB5ME19 914 aaKnown RBP15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ARHGAP6O43182 974 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 NDUFA10O95299 355 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ERBB2P04626 1255 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 H2AFZP0C0S5 128 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ENGP17813 658 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ABCB4P21439 1286 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 MMP8P22894 467 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 MAGEA1P43355 309 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 MAPK8P45983 427 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 KRT83P78385 493 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 BYSLQ13895 437 aaKnown RBP15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ASTE1Q2TB18 679 aaPredicted RBP15.46■□□□□ 0.07
UBXN1-218ENST00000616865 SLC23A3Q6PIS1 610 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 H2AFVQ71UI9 128 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ZDHHC17Q8IUH5 632 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 MCOLN2Q8IZK6 566 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 TXLNBQ8N3L3 684 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 GATA6Q92908 595 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 FAM149B1Q96BN6 582 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ZNF653Q96CK0 615 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 VCPIP1Q96JH7 1222 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 EIF3CQ99613 913 aaKnown RBP15.46■□□□□ 0.07
UBXN1-218ENST00000616865 SCNM1Q9BWG6 230 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ISCUQ9H1K1 167 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 TLR8Q9NR97 1041 aaKnown RBP15.46■□□□□ 0.07
UBXN1-218ENST00000616865 WDR35Q9P2L0 1181 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 SH3BP1Q9Y3L3 701 aa15.46■□□□□ 0.07
UBXN1-218ENST00000616865 ASCC3Q8N3C0 2202 aaKnown RBP15.45■□□□□ 0.06
UBXN1-218ENST00000616865 ANKRD62A6NC57 917 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 ZZEF1O43149 2961 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 HOXC11O43248 304 aaPredicted RBP15.45■□□□□ 0.06
UBXN1-218ENST00000616865 TULP3O75386 442 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 MYBL1P10243 752 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 HOXD12P35452 270 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 GABRB2P47870 512 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 TUBP50607 506 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 DAOAP59103 153 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 C2CD6Q53TS8 623 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 EFHC1Q5JVL4 640 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 HECTD3Q5T447 861 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 FAM102AQ5T9C2 384 aaPredicted RBP15.45■□□□□ 0.06
UBXN1-218ENST00000616865 SNX30Q5VWJ9 437 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 DNAJC24Q6P3W2 148 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 RAD9BQ6WBX8 426 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 FAM183BPQ6ZVS7 135 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 MON1BQ7L1V2 547 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 TRMT11Q7Z4G4 463 aaKnown RBP15.45■□□□□ 0.06
UBXN1-218ENST00000616865 PHLDB2Q86SQ0 1253 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 KIAA1328Q86T90 577 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 TMEM139Q8IV31 216 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 BBS7Q8IWZ6 715 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 PGBD3Q8N328 593 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 ZNF513Q8N8E2 541 aaPredicted RBP15.45■□□□□ 0.06
UBXN1-218ENST00000616865 KCNV2Q8TDN2 545 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 CTNNBL1Q8WYA6 563 aaPredicted RBP15.45■□□□□ 0.06
UBXN1-218ENST00000616865 IRGQQ8WZA9 623 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 TRIM62Q9BVG3 475 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 SELENOOQ9BVL4 669 aa15.45■□□□□ 0.06
UBXN1-218ENST00000616865 SLC32A1Q9H598 525 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms