RNA–Protein interactions for RNA: ENST00000616702.1

CCL3L3-202, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 2

Gene CCL3L3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-202ENST00000616702 NUCKS1Q9H1E3 243 aaKnown RBP14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 VPS16Q9H269 839 aa14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 FAM204AQ9H8W3 233 aa14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 PRDM16Q9HAZ2 1276 aa14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 CD248Q9HCU0 757 aa14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 SLC12A6Q9UHW9 1150 aa14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 FHOD1Q9Y613 1164 aa14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 ATXN2Q99700 1313 aaKnown RBP14.12□□□□□ -0.15
CCL3L3-202ENST00000616702 FAM170AA1A519 330 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 ATP5BP06576 529 aaKnown RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 ACADMP11310 421 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 HLA-EP13747 358 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 POLR2EP19388 210 aaKnown RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 ITPKAP23677 461 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 CD70P32970 193 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 LIMK1P53667 647 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 RPS24P62847 133 aaKnown RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 FOXK1P85037 733 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 ZNF33AQ06730 810 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 CDH18Q13634 790 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 TRIM61Q5EBN2 209 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 MS4A13Q5J8X5 152 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 TAF3Q5VWG9 929 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 RAP1GAP2Q684P5 730 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 MBLAC2Q68D91 279 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 C11orf57Q6ZUT1 292 aaPredicted RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 FAM183BPQ6ZVS7 135 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 ADIPOR2Q86V24 386 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 CHSY1Q86X52 802 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 SYT12Q8IV01 421 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 FAM71AQ8IYT1 594 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 ZNF557Q8N988 423 aaPredicted RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 PRCCQ92733 491 aaPredicted RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 SIPA1Q96FS4 1042 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 PRICKLE1Q96MT3 831 aaPredicted RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 IRX2Q9BZI1 471 aaPredicted RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 MKRN2Q9H000 416 aaKnown RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 CD93Q9NPY3 652 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 TMEM74BQ9NUR3 256 aa14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 XPO7Q9UIA9 1087 aaKnown RBP14.11□□□□□ -0.15
CCL3L3-202ENST00000616702 LNP1A1A4G5 178 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 C4orf47A7E2U8 309 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 HSF2BPO75031 334 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 ERBB2P04626 1255 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 GLI1P08151 1106 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 UCHL3P15374 230 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 CYP11B1P15538 503 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 ABCB4P21439 1286 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 PITX1P78337 314 aaPredicted RBP14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 IRX4P78413 519 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 ENPP2Q13822 863 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 PPM1JQ5JR12 505 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 SMYD5Q6GMV2 418 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 DPY19L2P1Q6NXN4 242 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 RGL4Q8IZJ4 473 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 LGI2Q8N0V4 545 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 ZNF366Q8N895 744 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 ATP6V0D2Q8N8Y2 350 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 TMEM35BQ8NCS4 154 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 FIBINQ8TAL6 211 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 WFDC5Q8TCV5 224 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 DDX1Q92499 740 aaKnown RBP14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 MYEOVQ96EZ4 313 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 BTN2A3PQ96KV6 586 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 NUSAP1Q9BXS6 441 aaKnown RBP14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 ANO10Q9NW15 660 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 DDIT4Q9NX09 232 aa14.1□□□□□ -0.15
CCL3L3-202ENST00000616702 KCNU1A8MYU2 1149 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 F5H5T6 163 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 H0Y626 953 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 CFIP05156 583 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 DLDP09622 509 aaKnown RBP14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 SLC2A3P11169 496 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 TACR2P21452 398 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 CD6P30203 668 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 CCR1P32246 355 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 DPP6P42658 865 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 RNASE9P60153 205 aaKnown RBP14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 ST8SIA6P61647 398 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 SLC6A3Q01959 620 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 LMAN2Q12907 356 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 NME3Q13232 169 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 KRT31Q15323 416 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 PTPN20Q4JDL3 420 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 FKBP15Q5T1M5 1219 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 RBM43Q6ZSC3 357 aaKnown RBP14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 ANKRD20A12PQ8NF67 263 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 TOE1Q96GM8 510 aaKnown RBP14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 HSPA12BQ96MM6 686 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 SLC2A13Q96QE2 648 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 STK33Q9BYT3 514 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 ITM2CQ9NQX7 267 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 FANCLQ9NW38 375 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 ASNSD1Q9NWL6 643 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 PILRBQ9UKJ0 227 aa14.09□□□□□ -0.15
CCL3L3-202ENST00000616702 DMXL1Q9Y485 3027 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms