RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 TIMM44O43615 452 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 SNUPNO95149 360 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 ABCG1P45844 678 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 CLNS1AP54105 237 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 DEUP1Q05D60 604 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 SLC25A52Q3SY17 297 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 PAN2Q504Q3 1202 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 USP6NLQ92738 828 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 LPPQ93052 612 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 OXNAD1Q96HP4 312 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 TNIP3Q96KP6 325 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 RILPQ96NA2 401 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 NMUR2Q9GZQ4 415 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 DENND2DQ9H6A0 471 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 PIGVQ9NUD9 493 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 PPARGC1AQ9UBK2 798 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 PSAT1Q9Y617 370 aa14.29□□□□□ -0.12
CACNA1C-231ENST00000616390 SMIM35A0A1B0GVV1 85 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 GYG2O15488 501 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ERVK-10P10266 1014 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ESRRAP11474 423 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 NR2C2P49116 596 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 TKTL1P51854 596 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 CDK16Q00536 496 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 NAA25Q14CX7 972 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 SV2CQ496J9 727 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 TRIM42Q8IWZ5 723 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 RNF169Q8NCN4 708 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 EDEM1Q92611 657 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 INPP5DQ92835 1189 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 A0A0A0MRY4 1105 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 NRP1O14786 923 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ZSCAN9O15535 394 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 LYPLA1O75608 230 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ENO1P06733 434 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 CTSHP09668 335 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ELF1P32519 619 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ACADSBP45954 432 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 PDE1BQ01064 536 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 UBXN11Q5T124 520 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 TRIM68Q6AZZ1 485 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ZNF467Q7Z7K2 595 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 CHSY1Q86X52 802 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 SMG8Q8ND04 991 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 MCUQ8NE86 351 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 RSRC1Q96IZ7 334 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 SPATA13Q96N96 652 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 APOL2Q9BQE5 337 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 CADM1Q9BY67 442 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 DUSP16Q9BY84 665 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 RHOBTB2Q9BYZ6 727 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 FRMD8Q9BZ67 464 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 EBF2Q9HAK2 575 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 KRT82Q9NSB4 513 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 EEF2KO00418 725 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 FCHO1O14526 889 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 F2P00734 622 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 AMHP03971 560 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 USP17L7P0C7H9 530 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 PSEN2P49810 448 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 ALDH18A1P54886 795 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 AQP5P55064 265 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 RPL10AP62906 217 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 IFRD2Q12894 506 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 PARP6Q2NL67 630 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 PPM1JQ5JR12 505 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 KIAA0319Q5VV43 1072 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 GTF3C2Q8WUA4 911 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 MCUR1Q96AQ8 359 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 NSL1Q96IY1 281 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 SYBUQ9NX95 663 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 DDX43Q9NXZ2 648 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 UBP1Q9NZI7 540 aa14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 MTO1Q9Y2Z2 717 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-231ENST00000616390 SDR42E2A6NKP2 422 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 FAM159BA6NKW6 160 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 XPO1O14980 1071 aaKnown RBP14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 NPR3P17342 541 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 KDSRQ06136 332 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 BPTFQ12830 3046 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 DSTYKQ6XUX3 929 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 CLEC20AQ6ZU45 233 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 STKLD1Q8NE28 680 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 OR52K1Q8NGK4 314 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 HSFY1Q96LI6 401 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 ULBP1Q9BZM6 244 aa14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 XAB2Q9HCS7 855 aaKnown RBP14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 KLHL8Q9P2G9 620 aaPredicted RBP14.27□□□□□ -0.12
CACNA1C-231ENST00000616390 YJEFN3A6XGL0 299 aa14.27□□□□□ -0.13
CACNA1C-231ENST00000616390 E7ENQ6 273 aa14.27□□□□□ -0.13
CACNA1C-231ENST00000616390 TPP1O14773 563 aa14.27□□□□□ -0.13
CACNA1C-231ENST00000616390 XPOTO43592 962 aaKnown RBP14.27□□□□□ -0.13
CACNA1C-231ENST00000616390 DGKIO75912 1065 aa14.27□□□□□ -0.13
CACNA1C-231ENST00000616390 NCAM1P13591 858 aa14.27□□□□□ -0.13
CACNA1C-231ENST00000616390 TPSB2P20231 275 aa14.27□□□□□ -0.13
CACNA1C-231ENST00000616390 SEMA5AQ13591 1074 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms