RNA–Protein interactions for RNA: ENST00000615497.4

TBC1D1-219, Transcript of TBC1 domain family member 1, humanhuman

TSL 2 BASIC

Gene TBC1D1, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-219ENST00000615497 SUFUQ9UMX1 484 aa15.96■□□□□ 0.15
TBC1D1-219ENST00000615497 FAM47DPA6NHR8 397 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 CXorf49A8MYA2 514 aaPredicted RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 KCNK1O00180 336 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 PRPF4O43172 522 aaKnown RBP eCLIP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 MRPL58Q14197 206 aaKnown RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 ARL13BQ3SXY8 428 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 VARS2Q5ST30 1063 aaKnown RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 PIGWQ7Z7B1 504 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 CASP10Q92851 521 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 CFAP36Q96G28 342 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 GORASP1Q9BQQ3 440 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 ZC3H7BQ9UGR2 993 aaKnown RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 NUDT5Q9UKK9 219 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 IRAK2O43187 625 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 OPHN1O60890 802 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 MYCP01106 439 aaPredicted RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 COL6A1P12109 1028 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 DDR2Q16832 855 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 UNC5AQ6ZN44 842 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 SCN4BQ8IWT1 228 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 PDCD7Q8N8D1 485 aaKnown RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 DEPDC1BQ8WUY9 529 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 SLC44A1Q8WWI5 657 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 DPF3Q92784 378 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 ELAC1Q9H777 363 aaKnown RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 SMYD2Q9NRG4 433 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 MARCH5Q9NX47 278 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 ARHGEF38Q9NXL2 777 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 SFMBT1Q9UHJ3 866 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 GRID1Q9ULK0 1009 aa15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 LAMA2P24043 3122 aaKnown RBP15.95■□□□□ 0.14
TBC1D1-219ENST00000615497 MSI1O43347 362 aaKnown RBP15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 TADA2AO75478 443 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 ASMTLO95671 621 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 PSMB4P28070 264 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 FOXN2P32314 431 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 RPA3P35244 121 aaPredicted RBP15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 ZSCAN18Q8TBC5 510 aaPredicted RBP15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 ABCC13Q9NSE7 274 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 SEPT10Q9P0V9 454 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 GGA2Q9UJY4 613 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 TRIM17Q9Y577 477 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 SCN5AQ14524 2016 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 TCP11X1B4DZS4 312 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 DNM1LO00429 736 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 PPP1R12AO14974 1030 aaPredicted RBP15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 FAM155BO75949 473 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 ATP2A2P16615 1042 aaKnown RBP15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 KRT4P19013 534 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 PRKCHP24723 683 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 PTPN3P26045 913 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 EPHB2P29323 1055 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 FDFT1P37268 417 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 MSH2P43246 934 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 SLC18A1P54219 525 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 CORO7P57737 925 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 USP46P62068 366 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 TRMT10BQ6PF06 316 aaKnown RBP15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 ATAD1Q8NBU5 361 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 LRRC39Q96DD0 335 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 PGLYRP2Q96PD5 576 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 EBNA1BP2Q99848 306 aaKnown RBP15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 OSBPL2Q9H1P3 480 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 SENP1Q9P0U3 644 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 ADAM28Q9UKQ2 775 aa15.94■□□□□ 0.14
TBC1D1-219ENST00000615497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 A0A1W2PQH9 124 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SPAG6O75602 509 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 VIMP08670 466 aaKnown RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 PPIDQ08752 370 aaKnown RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SF3A3Q12874 501 aaKnown RBP eCLIP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 MTFR1Q15390 333 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SLC1A5Q15758 541 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 GKAP1Q5VSY0 366 aaPredicted RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 FAM171A1Q5VUB5 890 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 RSPO2Q6UXX9 243 aaPredicted RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SH2D5Q6ZV89 423 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 TMEM173Q86WV6 379 aaPredicted RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 DYDC1Q8WWB3 177 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 FAM193BQ96PV7 902 aaPredicted RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SMOC2Q9H3U7 446 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 PIH1D1Q9NWS0 290 aaKnown RBP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SYN3O14994 580 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 PBX3P40426 434 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SLC11A1P49279 550 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 PRMT2P55345 433 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 CRADDP78560 199 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 FAAP100Q0VG06 881 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 GALNT2Q10471 571 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 IFT88Q13099 833 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 BFSP2Q13515 415 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 PARP6Q2NL67 630 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 BTBD8Q5XKL5 378 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 TAX1BP1Q86VP1 789 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 CEP57Q86XR8 500 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 ARNTL2Q8WYA1 636 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 FUBP3Q96I24 572 aaKnown RBP eCLIP15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 SMC6Q96SB8 1091 aa15.93■□□□□ 0.14
TBC1D1-219ENST00000615497 KLF6Q99612 283 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms