RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 HEMGNQ9BXL5 484 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 BCO2Q9BYV7 579 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 NINJ2Q9NZG7 142 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 PSTPIP1O43586 416 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 OPHN1O60890 802 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 TCEA3O75764 348 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 PDE5AO76074 875 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 CDK4P11802 303 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 ACO1P21399 889 aaKnown RBP13.47□□□□□ -0.25
FOXN3-219ENST00000615335 IGFBP6P24592 240 aaPredicted RBP13.47□□□□□ -0.25
FOXN3-219ENST00000615335 GALK1P51570 392 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 EMP3P54852 163 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 DEFB103AP81534 67 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 IL9RQ01113 521 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
FOXN3-219ENST00000615335 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 ACSBG2Q5FVE4 666 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 ZNF449Q6P9G9 518 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 RHOT1Q8IXI2 618 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 UROC1Q96N76 676 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 LSM1O15116 133 aaKnown RBP13.47□□□□□ -0.25
FOXN3-219ENST00000615335 OR1G1P47890 313 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 YWHAEP62258 255 aaKnown RBP13.47□□□□□ -0.25
FOXN3-219ENST00000615335 CCNG2Q16589 344 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 CCDC153Q494R4 210 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 KBTBD2Q8IY47 623 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 TNS4Q8IZW8 715 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 ARHGAP24Q8N264 748 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 CCDC89Q8N998 374 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 C3orf58Q8NDZ4 430 aa13.47□□□□□ -0.25
FOXN3-219ENST00000615335 LBHD1Q9BQE6 289 aaPredicted RBP13.47□□□□□ -0.25
FOXN3-219ENST00000615335 MRPL9Q9BYD2 267 aaKnown RBP13.47□□□□□ -0.25
FOXN3-219ENST00000615335 FNDC1Q4ZHG4 1894 aaPredicted RBP13.46□□□□□ -0.25
FOXN3-219ENST00000615335 MATN2O00339 956 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 NDC80O14777 642 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 B4GALT3O60512 393 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 HUS1O60921 280 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 DGKIO75912 1065 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 BRAFP15056 766 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 TAC1P20366 129 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 RPL26P61254 145 aaKnown RBP13.46□□□□□ -0.25
FOXN3-219ENST00000615335 KLF1Q13351 362 aaPredicted RBP13.46□□□□□ -0.25
FOXN3-219ENST00000615335 HNRNPDQ14103 355 aaKnown RBP13.46□□□□□ -0.25
FOXN3-219ENST00000615335 SLC45A4Q5BKX6 768 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 IZUMO3Q5VZ72 239 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 IZUMO2Q6UXV1 221 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 TRIM72Q6ZMU5 477 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 CYP4X1Q8N118 509 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.46□□□□□ -0.25
FOXN3-219ENST00000615335 GDAP1Q8TB36 358 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 ITPKCQ96DU7 683 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 PWWP2AQ96N64 755 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 C11orf70Q9BRQ4 267 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 BTBD10Q9BSF8 475 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 SDCBP2Q9H190 292 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 METTL5Q9NRN9 209 aaKnown RBP13.46□□□□□ -0.25
FOXN3-219ENST00000615335 SSX2IPQ9Y2D8 614 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 NEU2Q9Y3R4 380 aa13.46□□□□□ -0.25
FOXN3-219ENST00000615335 E9PBE3 544 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 HALP42357 657 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 NEK3P51956 506 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 DSC1Q08554 894 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 SOWAHAQ2M3V2 549 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 RFWD3Q6PCD5 774 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 DCLRE1AQ6PJP8 1040 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 DSTYKQ6XUX3 929 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 BBS5Q8N3I7 341 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 APPL2Q8NEU8 664 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 CGREF1Q99674 301 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 CCDC77Q9BR77 488 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 CADM1Q9BY67 442 aaKnown RBP13.45□□□□□ -0.26
FOXN3-219ENST00000615335 OSBPL8Q9BZF1 889 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 MRPL47Q9HD33 250 aaKnown RBP13.45□□□□□ -0.26
FOXN3-219ENST00000615335 MLXIPLQ9NP71 852 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 GDAP2Q9NXN4 497 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 LGALS13Q9UHV8 139 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 FOXO6A8MYZ6 492 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 F8W8V4 182 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 CYB561D2O14569 222 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 S100A1P23297 94 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 TAS2R40P59535 323 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-219ENST00000615335 TRIM67Q6ZTA4 783 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 PATL1Q86TB9 770 aaKnown RBP13.45□□□□□ -0.26
FOXN3-219ENST00000615335 KATNAL2Q8IYT4 538 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 UBR7Q8N806 425 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 SCAIQ8N9R8 606 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 FAM118BQ9BPY3 351 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 ZDHHC7Q9NXF8 308 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 CLIC5Q9NZA1 410 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 HCSTQ9UBK5 93 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 ZFP69BQ9UJL9 534 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms