RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ZNF572Q7Z3I7 529 aaPredicted RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 SLC47A2Q86VL8 602 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 CDR2LQ86X02 465 aaPredicted RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 FAM9CQ8IZT9 166 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 SYCE1Q8N0S2 351 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 BBOF1Q8ND07 529 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 CALML6Q8TD86 181 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 RAPGEF5Q92565 580 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 NOX5Q96PH1 765 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 XPO6Q96QU8 1125 aaKnown RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 TMEM175Q9BSA9 504 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 A0A088AWK7 358 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 RCCD1A6NED2 376 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 ARL5CA6NH57 179 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 M0QZQ0 153 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 CHEK2O96017 543 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 GNA15P30679 374 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 TSPAN7P41732 249 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 GABRB2P47870 512 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 OSTNP61366 133 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 TAP1Q03518 808 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 CORO6Q6QEF8 472 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 B3GNT6Q6ZMB0 384 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 CADM3Q8N126 398 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 LINC01599Q8WXQ3 324 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 TMEM176AQ96HP8 235 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 LACRTQ9GZZ8 138 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 RNF19AQ9NV58 838 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 GMIPQ9P107 970 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 SMIM31A0A1B0GVY4 71 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 NBNO60934 754 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 NAGAP17050 411 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 TYMPP19971 482 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 VHLP40337 213 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 NOMO3P69849 1222 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 GPC5P78333 572 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 TUSC3Q13454 348 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 SPOPLQ6IQ16 392 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 ZNF449Q6P9G9 518 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 BEND5Q7L4P6 421 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 RTN4RL1Q86UN2 441 aaPredicted RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 ST13P4Q8IZP2 240 aaPredicted RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 KIF2BQ8N4N8 673 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 CAVIN3Q969G5 261 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 PCDHB18PQ96TA0 734 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 ADAM2Q99965 735 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 DDX23Q9BUQ8 820 aaKnown RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 SDCBP2Q9H190 292 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 EHD1Q9H4M9 534 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 FANCFQ9NPI8 374 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 RNF14Q9UBS8 474 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 MTRF1LQ9UGC7 380 aaKnown RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 PARP2Q9UGN5 583 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 SH3PXD2BA1X283 911 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 KPNA7A9QM74 516 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 ICMTO60725 284 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CNOT3O75175 753 aaKnown RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 MAP3K6O95382 1288 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 LYNP07948 512 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CTSHP09668 335 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CFL1P23528 166 aaKnown RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 MAP3K7CLP57077 242 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 PTP4A2Q12974 167 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 UPP1Q16831 310 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CNKSR3Q6P9H4 555 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 LCLAT1Q6UWP7 414 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 C4orf22Q6V702 233 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 MON1BQ7L1V2 547 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 ARCQ7LC44 396 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 LRRC57Q8N9N7 239 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 SLC4A11Q8NBS3 891 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 EPS8L3Q8TE67 593 aaKnown RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 ZNF606Q8WXB4 792 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 MAML1Q92585 1016 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CHMP6Q96FZ7 201 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 COX4I2Q96KJ9 171 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 NUDCD1Q96RS6 583 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 MMS19Q96T76 1030 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 HERC2P3Q9BVR0 1158 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 RNF39Q9H2S5 420 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 STOML1Q9UBI4 398 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 DOLKQ9UPQ8 538 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 GINS2Q9Y248 185 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 SCN1AP35498 2009 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 ZSCAN5BA6NJL1 495 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 HGSO14964 777 aaPredicted RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 NCK2O43639 380 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 UBOX5O94941 541 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 UBTFL6P0CB48 400 aaPredicted RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 ZCCHC18P0CG32 403 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 HOXC13P31276 330 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 MAN1A1P33908 653 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 GALCP54803 685 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 COPS2P61201 443 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 SP140Q13342 867 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CLUL1Q15846 466 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 PKDCCQ504Y2 493 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms