RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 BCLAF3A2AJT9 711 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 MTMR11A4FU01 709 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CXorf49A8MYA2 514 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 GOLGA8TH3BQL2 631 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZBTB24O43167 697 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 ATP9BO43861 1147 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 IRF1P10914 325 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 YWHAQP27348 245 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 GCAP28676 217 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ABCG1P45844 678 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TUBP50607 506 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZBTB17Q13105 803 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 BMPR2Q13873 1038 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 IKBKEQ14164 716 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 KCNJ11Q14654 390 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 QPCTQ16769 361 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 LRRC26Q2I0M4 334 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 KBTBD12Q3ZCT8 623 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 PM20D1Q6GTS8 502 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TRMT10BQ6PF06 316 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 PCGF5Q86SE9 256 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CAND1Q86VP6 1230 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 SPNS2Q8IVW8 549 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZNF567Q8N184 647 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CFAP52Q8N1V2 620 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ARFGAP2Q8N6H7 521 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 FBXO22Q8NEZ5 403 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 SPATA22Q8NHS9 363 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 PGM2Q96G03 612 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ATXN7L3BQ96GX2 97 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZNF512Q96ME7 567 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 XPO6Q96QU8 1125 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 EPAS1Q99814 870 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TTPALQ9BTX7 342 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 NACA2Q9H009 215 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TSPYL1Q9H0U9 437 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ABCC13Q9NSE7 274 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 SMPD4Q9NXE4 827 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZC3H7BQ9UGR2 993 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 SLC12A6Q9UHW9 1150 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 GGT7Q9UJ14 662 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 RABGEF1Q9UJ41 708 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 SF3B1O75533 1304 aaKnown RBP eCLIP3.54□□□□□ -1.84
LIG4-205ENST00000614526 RALGAPA2Q2PPJ7 1873 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TDRD15B5MCY1 1934 aaKnown RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 TCRBV9S1A1TA0A576 114 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PITPNM1O00562 1244 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 DCLK1O15075 740 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 IRAK2O43187 625 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CDH16O75309 829 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CNTN5O94779 1100 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CPP00450 1065 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 F9P00740 461 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 AGTP01019 485 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 RAG1P15918 1043 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ZFXP17010 805 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 MGAT1P26572 445 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CCR1P32246 355 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 GMPRP36959 345 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 SCNN1AP37088 669 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ETFBP38117 255 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 MSH2P43246 934 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CXCR3P49682 368 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 KCNQ1P51787 676 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PRMT2P55345 433 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 SKOR1P84550 965 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ITKQ08881 620 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 WASHC5Q12768 1159 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 DPYSQ14117 519 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 BTG3Q14201 252 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 PDK1Q15118 436 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 NFE2Q16621 373 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 RAP1GAP2Q684P5 730 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 RFWD3Q6PCD5 774 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CPLX4Q7Z7G2 160 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PNPLA1Q8N8W4 532 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 DNAAF3Q8N9W5 541 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 OR52K1Q8NGK4 314 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CCT8L2Q96SF2 557 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PAFAH2Q99487 392 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 NCAPGQ9BPX3 1015 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 VN1R3Q9BXE9 311 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 CYP4F11Q9HBI6 524 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 GKN1Q9NS71 199 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 PSD3Q9NYI0 1048 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 ZMYND8Q9ULU4 1186 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 MYO9BQ13459 2157 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 A0A0A0MRY4 1105 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 TRIM43BA6NCK2 446 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 DGKIO75912 1065 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 NEBLO76041 1014 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 GJB5O95377 273 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 VNN2O95498 520 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 MT-CYBP00156 380 aaPredicted RBP3.53□□□□□ -1.84
LIG4-205ENST00000614526 FAM163BP0C2L3 166 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 KRT4P19013 534 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 NFKB1P19838 968 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 NR2C2P49116 596 aa3.53□□□□□ -1.84
LIG4-205ENST00000614526 LBX1P52954 281 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms