RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 MYOFQ9NZM1 2061 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 ACSL4O60488 711 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 TJP3O95049 919 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 PECAM1P16284 738 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-207ENST00000614256 PFKLP17858 780 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 HARS2P49590 506 aaKnown RBP19.32■□□□□ 0.68
CHTOP-207ENST00000614256 AUHQ13825 339 aaKnown RBP19.32■□□□□ 0.68
CHTOP-207ENST00000614256 EP400NLQ6ZTU2 488 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 MNS1Q8NEH6 495 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 C1orf54Q8WWF1 131 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 USP13Q92995 863 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-207ENST00000614256 EPAS1Q99814 870 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 MAK16Q9BXY0 300 aaKnown RBP19.32■□□□□ 0.68
CHTOP-207ENST00000614256 DDX47Q9H0S4 455 aaKnown RBP19.32■□□□□ 0.68
CHTOP-207ENST00000614256 S1PR5Q9H228 398 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 SLC12A6Q9UHW9 1150 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 VANGL2Q9ULK5 521 aa19.32■□□□□ 0.68
CHTOP-207ENST00000614256 SPTBN5Q9NRC6 3674 aaKnown RBP19.31■□□□□ 0.68
CHTOP-207ENST00000614256 E9PAM4 449 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 AVPR1AP37288 418 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 NRG1Q02297 640 aaPredicted RBP19.31■□□□□ 0.68
CHTOP-207ENST00000614256 COL19A1Q14993 1142 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 NCBP2-AS2Q69YL0 99 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 RFWD3Q6PCD5 774 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 Q7L0L9 218 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 NETO2Q8NC67 525 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 CFAP97Q9P2B7 532 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 ARHGAP26Q9UNA1 814 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 SHROOM3Q8TF72 1996 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 PRUNE2Q8WUY3 3088 aa19.31■□□□□ 0.68
CHTOP-207ENST00000614256 LEFTY2O00292 366 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 DCLK1O15075 740 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 HOXB8P17481 243 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-207ENST00000614256 ERCC2P18074 760 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 EPHB2P29323 1055 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 HOXC13P31276 330 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 HCAR3P49019 387 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 ITIH3Q06033 890 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 CLUL1Q15846 466 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 FBXL22Q6P050 247 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 Q6ZNB5 142 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 KLHL7Q8IXQ5 586 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-207ENST00000614256 IGSF8Q969P0 613 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 ADAM7Q9H2U9 754 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 MPP6Q9NZW5 540 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 NYNRINQ9P2P1 1898 aaKnown RBP19.3■□□□□ 0.68
CHTOP-207ENST00000614256 APOL1O14791 398 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 MAP3K6O95382 1288 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 TACR2P21452 398 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 FSHRP23945 695 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 MRPS25P82663 173 aaKnown RBP19.3■□□□□ 0.68
CHTOP-207ENST00000614256 GBE1Q04446 702 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 TFDP2Q14188 446 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 RWDD4Q6NW29 188 aaKnown RBP19.3■□□□□ 0.68
CHTOP-207ENST00000614256 TTC27Q6P3X3 843 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 C1orf228Q6PIY5 440 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 CHSY1Q86X52 802 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 NPAS3Q8IXF0 933 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 SH3RF2Q8TEC5 729 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 DCLK3Q9C098 648 aa19.3■□□□□ 0.68
CHTOP-207ENST00000614256 CLUHO75153 1309 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 SOBPA7XYQ1 873 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 APOC4-APOC2K7ER74 178 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 TRDMT1O14717 391 aaKnown RBP19.29■□□□□ 0.68
CHTOP-207ENST00000614256 APOC2P02655 101 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 SLC11A2P49281 568 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 OTUD4Q01804 1114 aaKnown RBP19.29■□□□□ 0.68
CHTOP-207ENST00000614256 SLC10A2Q12908 348 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-207ENST00000614256 SNX1Q13596 522 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 CYP1B1Q16678 543 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 GET4Q7L5D6 327 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-207ENST00000614256 ARID3BQ8IVW6 561 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-207ENST00000614256 TP53INP2Q8IXH6 220 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 CCDC33Q8N5R6 958 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 ACTL9Q8TC94 416 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 MAIP1Q8WWC4 291 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 FGF13Q92913 245 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 AZIN2Q96A70 460 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 TBC1D31Q96DN5 1066 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 MSLNLQ96KJ4 702 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 PRICKLE1Q96MT3 831 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-207ENST00000614256 KRT12Q99456 494 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 GAS2L1Q99501 681 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-207ENST00000614256 TDP1Q9NUW8 608 aa19.29■□□□□ 0.68
CHTOP-207ENST00000614256 IGLV3-10A0A075B6K4 115 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 DAPK3O43293 454 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 MFSD11O43934 449 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 PHF2O75151 1096 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 CNTN5O94779 1100 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 SGSHP51688 502 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 ALFQ53S48 1182 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 CIR1Q86X95 450 aaPredicted RBP19.28■□□□□ 0.68
CHTOP-207ENST00000614256 LGI2Q8N0V4 545 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 NPWQ8N729 165 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 C12orf50Q8NA57 414 aaPredicted RBP19.28■□□□□ 0.68
CHTOP-207ENST00000614256 ZSCAN18Q8TBC5 510 aaPredicted RBP19.28■□□□□ 0.68
CHTOP-207ENST00000614256 MYLIPQ8WY64 445 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 NDFIP2Q9NV92 336 aa19.28■□□□□ 0.68
CHTOP-207ENST00000614256 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms