RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SNX16P57768 344 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 GFPT1Q06210 699 aaPredicted RBP23.57■■□□□ 1.36
FAM228B-208ENST00000613899 CAMK2GQ13555 558 aaPredicted RBP23.57■■□□□ 1.36
FAM228B-208ENST00000613899 CDH18Q13634 790 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 VWA3BQ502W6 1294 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 MS4A13Q5J8X5 152 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 CT47A1Q5JQC4 288 aaPredicted RBP23.57■■□□□ 1.36
FAM228B-208ENST00000613899 WDR45BQ5MNZ6 344 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 PSAPL1Q6NUJ1 521 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 PASD1Q8IV76 773 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 RGL4Q8IZJ4 473 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 FIBINQ8TAL6 211 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 TOE1Q96GM8 510 aaKnown RBP23.57■■□□□ 1.36
FAM228B-208ENST00000613899 PPP1R13BQ96KQ4 1090 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 NUCKS1Q9H1E3 243 aaKnown RBP23.57■■□□□ 1.36
FAM228B-208ENST00000613899 LHX5Q9H2C1 402 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 ASNSD1Q9NWL6 643 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 CEP83Q9Y592 693 aa23.57■■□□□ 1.36
FAM228B-208ENST00000613899 PCDH15Q96QU1 1955 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 IGLV3-19P01714 112 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 MAPK8P45983 427 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 NOVA1P51513 510 aaKnown RBP23.56■■□□□ 1.36
FAM228B-208ENST00000613899 ATXN3P54252 364 aaPredicted RBP23.56■■□□□ 1.36
FAM228B-208ENST00000613899 PTPRNQ16849 979 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 EFHC1Q5JVL4 640 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 MIIPQ5JXC2 388 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 BTN2A3PQ96KV6 586 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 CPXM1Q96SM3 734 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 CAPN10Q9HC96 672 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 TJP2Q9UDY2 1190 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 AJAP1Q9UKB5 411 aaPredicted RBP23.56■■□□□ 1.36
FAM228B-208ENST00000613899 NFE2L3Q9Y4A8 694 aa23.56■■□□□ 1.36
FAM228B-208ENST00000613899 MEI4A8MW99 385 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 HSF2BPO75031 334 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 GNSP15586 552 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 KRT9P35527 623 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 RPS24P62847 133 aaKnown RBP23.55■■□□□ 1.36
FAM228B-208ENST00000613899 CDK17Q00537 523 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 UAP1L1Q3KQV9 507 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 DCAF6Q58WW2 860 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 ZC3H12AQ5D1E8 599 aaKnown RBP23.55■■□□□ 1.36
FAM228B-208ENST00000613899 N4BP2L1Q5TBK1 243 aaPredicted RBP23.55■■□□□ 1.36
FAM228B-208ENST00000613899 CHSY1Q86X52 802 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 CACUL1Q86Y37 369 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 CARNMT1Q8N4J0 409 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 WDTC1Q8N5D0 677 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 ATP6V0D2Q8N8Y2 350 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 C1orf131Q8NDD1 294 aaKnown RBP23.55■■□□□ 1.36
FAM228B-208ENST00000613899 CADM4Q8NFZ8 388 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 GPR174Q9BXC1 333 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 FAM204AQ9H8W3 233 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.55■■□□□ 1.36
FAM228B-208ENST00000613899 SLC12A6Q9UHW9 1150 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 ADAMTS9Q9P2N4 1935 aa23.55■■□□□ 1.36
FAM228B-208ENST00000613899 ASCC3Q8N3C0 2202 aaKnown RBP23.55■■□□□ 1.36
FAM228B-208ENST00000613899 KCNJ18B7U540 433 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 PES1O00541 588 aaKnown RBP23.54■■□□□ 1.36
FAM228B-208ENST00000613899 LUC7L3O95232 432 aaKnown RBP23.54■■□□□ 1.36
FAM228B-208ENST00000613899 ASLP04424 464 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 SLC2A3P11169 496 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 CSRP1P21291 193 aaKnown RBP23.54■■□□□ 1.36
FAM228B-208ENST00000613899 BPIFB4P59827 614 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 KCNJ12Q14500 433 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 HSP90AA4PQ58FG1 418 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 C11orf57Q6ZUT1 292 aaPredicted RBP23.54■■□□□ 1.36
FAM228B-208ENST00000613899 ZNF366Q8N895 744 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 LMLNQ96KR4 655 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 SLC2A13Q96QE2 648 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 NUP58Q9BVL2 599 aa23.54■■□□□ 1.36
FAM228B-208ENST00000613899 TPRP12270 2363 aaKnown RBP23.54■■□□□ 1.36
FAM228B-208ENST00000613899 CACNA1EQ15878 2313 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 FOXN3O00409 490 aaPredicted RBP23.53■■□□□ 1.36
FAM228B-208ENST00000613899 MOCS3O95396 460 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 SYPP08247 313 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 C7P10643 843 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 EEF1GP26641 437 aaKnown RBP23.53■■□□□ 1.36
FAM228B-208ENST00000613899 CLCN1P35523 988 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 ST8SIA6P61647 398 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 ZBTB16Q05516 673 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 TAF5Q15542 800 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 SH3PXD2AQ5TCZ1 1133 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 RAP1GAP2Q684P5 730 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 SLC47A2Q86VL8 602 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 FAM71AQ8IYT1 594 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 LGI2Q8N0V4 545 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 DEFB106AQ8N104 65 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 TTC17Q96AE7 1141 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 MYEOVQ96EZ4 313 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 GTPBP2Q9BX10 602 aaKnown RBP23.53■■□□□ 1.36
FAM228B-208ENST00000613899 SYNCQ9H7C4 482 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 LMBRD1Q9NUN5 540 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 DDIT4Q9NX09 232 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 SUN2Q9UH99 717 aa23.53■■□□□ 1.36
FAM228B-208ENST00000613899 XPO7Q9UIA9 1087 aaKnown RBP23.53■■□□□ 1.36
FAM228B-208ENST00000613899 KCNU1A8MYU2 1149 aa23.52■■□□□ 1.36
FAM228B-208ENST00000613899 F5H5T6 163 aa23.52■■□□□ 1.36
FAM228B-208ENST00000613899 H0Y626 953 aa23.52■■□□□ 1.36
FAM228B-208ENST00000613899 PNMA6AP0CW24 399 aaPredicted RBP23.52■■□□□ 1.36
FAM228B-208ENST00000613899 CEACAM1P13688 526 aa23.52■■□□□ 1.36
FAM228B-208ENST00000613899 ABCB4P21439 1286 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms