RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PLK2Q9NYY3 685 aa13.72□□□□□ -0.21
MDC1-209ENST00000613547 XPO7Q9UIA9 1087 aaKnown RBP13.72□□□□□ -0.21
MDC1-209ENST00000613547 PCDHA13Q9Y5I0 950 aa13.72□□□□□ -0.21
MDC1-209ENST00000613547 GFRA2O00451 464 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 HOXD9P28356 352 aaPredicted RBP13.71□□□□□ -0.21
MDC1-209ENST00000613547 GRIA2P42262 883 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 KDSRQ06136 332 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 CDH18Q13634 790 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 AUHQ13825 339 aaKnown RBP13.71□□□□□ -0.21
MDC1-209ENST00000613547 GAB4Q2WGN9 574 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 EFHC2Q5JST6 749 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 MFN1Q8IWA4 741 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 SYNPOQ8N3V7 929 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 PRICKLE1Q96MT3 831 aaPredicted RBP13.71□□□□□ -0.21
MDC1-209ENST00000613547 PRMT1Q99873 361 aaKnown RBP13.71□□□□□ -0.21
MDC1-209ENST00000613547 TRIM7Q9C029 511 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 STIM2Q9P246 746 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 VANGL2Q9ULK5 521 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 HS3ST4Q9Y661 456 aa13.71□□□□□ -0.21
MDC1-209ENST00000613547 COL4A2P08572 1712 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 A0A1B0GVM2 712 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 TCAF2A6NFQ2 919 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 SHISA7A6NL88 538 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 KAT7O95251 611 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 PCK1P35558 622 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 RPS9P46781 194 aaKnown RBP13.7□□□□□ -0.22
MDC1-209ENST00000613547 SLC6A11P48066 632 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 OXCT1P55809 520 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
MDC1-209ENST00000613547 ZNF252P-AS1Q0IIN9 211 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 SCAPQ12770 1279 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 CWF19L1Q69YN2 538 aaKnown RBP13.7□□□□□ -0.22
MDC1-209ENST00000613547 FSTL4Q6MZW2 842 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 FBXL22Q6P050 247 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 RAD9BQ6WBX8 426 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 C12orf40Q86WS4 652 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 TMEM139Q8IV31 216 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 CCDC105Q8IYK2 499 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 NIPA2Q8N8Q9 360 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 TERB1Q8NA31 727 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 SLC35G2Q8TBE7 412 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 IER2Q9BTL4 223 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 OSBPL2Q9H1P3 480 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 LMAN1LQ9HAT1 526 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 SLC27A6Q9Y2P4 619 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 TICRRQ7Z2Z1 1910 aa13.7□□□□□ -0.22
MDC1-209ENST00000613547 H0Y626 953 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 ARHGAP6O43182 974 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 LRCH4O75427 683 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 CLDN11O75508 207 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 MTA2O94776 668 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 PROSCO94903 275 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 PTMAP06454 111 aaKnown RBP13.69□□□□□ -0.22
MDC1-209ENST00000613547 GGCXP38435 758 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 SSR1P43307 286 aaKnown RBP13.69□□□□□ -0.22
MDC1-209ENST00000613547 TNFRSF4P43489 277 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 E2F5Q15329 346 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 HADHQ16836 314 aaKnown RBP13.69□□□□□ -0.22
MDC1-209ENST00000613547 RAB6CQ53S08 254 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 NAIF1Q69YI7 327 aaPredicted RBP13.69□□□□□ -0.22
MDC1-209ENST00000613547 ANKS1BQ7Z6G8 1248 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 KIAA1328Q86T90 577 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 LRRC8AQ8IWT6 810 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 CFAP52Q8N1V2 620 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 CARNMT1Q8N4J0 409 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 WFIKKN2Q8TEU8 576 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 RAB6CQ9H0N0 254 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 FBRSL1Q9HCM7 1045 aaKnown RBP13.69□□□□□ -0.22
MDC1-209ENST00000613547 OSGEPQ9NPF4 335 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 C11orf16Q9NQ32 467 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 ANLNQ9NQW6 1124 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 TMPRSS4Q9NRS4 437 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 OR12D3Q9UGF7 316 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 FBXO10Q9UK96 956 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 USP18Q9UMW8 372 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
MDC1-209ENST00000613547 TECTAO75443 2155 aa13.69□□□□□ -0.22
MDC1-209ENST00000613547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 A0A0A6YYK5 440 aaPredicted RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 E9PAM4 449 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 I6L893 689 aaPredicted RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 SRGAP2O75044 1071 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 LUC7L3O95232 432 aaKnown RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 MOCS3O95396 460 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 EGFP01133 1207 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 DCNP07585 359 aaKnown RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 CHRNB1P11230 501 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 MIPP30301 263 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 ARHGAP25P42331 645 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 NOP2P46087 812 aaKnown RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 SGSHP51688 502 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 VAV2P52735 878 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 CDH4P55283 916 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 NRG1Q02297 640 aaPredicted RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 CCINQ13939 588 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms