RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 RFX4Q33E94 735 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MPP7Q5T2T1 576 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SEL1L3Q68CR1 1132 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 C3orf33Q6P1S2 294 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ECHDC2Q86YB7 292 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TBC1D15Q8TC07 691 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CEP170P1Q96L14 293 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 NLRP3Q96P20 1036 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 HAPLN3Q96S86 360 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SLC22A4Q9H015 551 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ARMCX1Q9P291 453 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SHBGP04278 402 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF23P17027 643 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PCYOX1Q9UHG3 505 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ADAMTSL3P82987 1691 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TYW5A2RUC4 315 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PTGES3LE9PB15 166 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TMEM253P0C7T8 217 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CDH1P12830 882 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PDGFRAP16234 1089 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MAB21L1Q13394 359 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PGS1Q32NB8 556 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TBRG1Q3YBR2 411 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 HES5Q5TA89 166 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ABTB2Q8N961 1025 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SMYD2Q9NRG4 433 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CDV3Q9UKY7 258 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 OR14I1A6ND48 311 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ERVV-2B6SEH9 535 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZW10O43264 779 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 AP1S2P56377 157 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 YWHAHQ04917 246 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TSNQ15631 228 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 FAM98BQ52LJ0 330 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MZT2AQ6P582 158 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ERO1BQ86YB8 467 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PPIL6Q8IXY8 311 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 S100PBPQ96BU1 408 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF347Q96SE7 839 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 LPIN3Q9BQK8 851 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MYL10Q9BUA6 226 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CPNE5Q9HCH3 593 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PCDHB6Q9Y5E3 794 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 BAZ2BQ9UIF8 2168 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 WNT7AO00755 349 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CDC40O60508 579 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TCEA3O75764 348 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CNTFP26441 200 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 HTR2BP41595 481 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ABCG1P45844 678 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 FAM109AQ8N4B1 249 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ATPAF2Q8N5M1 289 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SNX18Q96RF0 628 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CD93Q9NPY3 652 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 BIN3Q9NQY0 253 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TRAFD1O14545 582 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TCN1P20061 433 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MUTP22033 750 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TECP42680 631 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PRMT2P55345 433 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SEMA3AQ14563 771 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CHPFQ8IZ52 775 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DCAF5Q96JK2 942 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ART5Q96L15 291 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 IP6K2Q9UHH9 426 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 NWD2Q9ULI1 1742 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 BTNL10A8MVZ5 291 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SH2B2O14492 632 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 HUS1O60921 280 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CYP19A1P11511 503 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 NADK2Q4G0N4 442 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TYW3Q6IPR3 259 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TAF8Q7Z7C8 310 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MAGEB6Q8N7X4 407 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DNAJA4Q8WW22 397 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MAGEB10Q96LZ2 347 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MED11Q9P086 117 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 E7ENX8 843 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 CDK18Q07002 472 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 KCNH2Q12809 1159 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 MKRN4PQ13434 485 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF410Q86VK4 478 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 SLC26A11Q86WA9 606 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 ATP6V0D2Q8N8Y2 350 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 BPIFB6Q8NFQ5 453 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 GON7Q9BXV9 100 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 IFT22Q9H7X7 185 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 UCKL1Q9NWZ5 548 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 RDH8Q9NYR8 311 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 CDH9Q9ULB4 789 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 STXBP5LQ9Y2K9 1186 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 SLC16A3O15427 465 aaKnown RBP5.05□□□□□ -1.6
VPS13D-213ENST00000613099 CYP7A1P22680 504 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 PRKAA2P54646 552 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 NCOA4Q13772 614 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 ANKRD40Q6AI12 368 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 PRR5LQ6MZQ0 368 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 IFNEQ86WN2 208 aa5.05□□□□□ -1.6
VPS13D-213ENST00000613099 C9orf72Q96LT7 481 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms