RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 LPXNO60711 386 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 EDF1O60869 148 aaKnown RBP12.3□□□□□ -0.44
USP6NL-206ENST00000609853 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 GNRH1P01148 92 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 BDNFP23560 247 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 CACNA2D1P54289 1103 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 C1QTNF8P60827 252 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 FAM189BP81408 668 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 FAAP100Q0VG06 881 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 SLC1A5Q15758 541 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 BRMS1LQ5PSV4 323 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 DENND5BQ6ZUT9 1274 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 SH2D5Q6ZV89 423 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 SLC24A5Q71RS6 500 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 CHSY1Q86X52 802 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 CTAGE3PQ8IX95 158 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 PPM1NQ8N819 430 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF398Q8TD17 642 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 TCP10LQ8TDR4 215 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 PXYLP1Q8TE99 480 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 HDAC11Q96DB2 347 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 SEZ6LQ9BYH1 1024 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 RXFP1Q9HBX9 757 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 ABCC13Q9NSE7 274 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
USP6NL-206ENST00000609853 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 RNF186Q9NXI6 227 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 MOCS1Q9NZB8 636 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 PHTF1Q9UMS5 762 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 SLC12A4Q9UP95 1085 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 IGLV3-25P01717 112 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 DHRS4L1P0CG22 281 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 CKBP12277 381 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 ELNP15502 786 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 ALDH3A1P30838 453 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 BRCC3P46736 316 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 NEK3P51956 506 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 COG7P83436 770 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 YWHAHQ04917 246 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-206ENST00000609853 SLC20A2Q08357 652 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 MTM1Q13496 603 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 ZKSCAN8Q15776 578 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-206ENST00000609853 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 ITPRIPL1Q6GPH6 555 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 TIFABQ6ZNK6 161 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-206ENST00000609853 PRPF39Q86UA1 669 aaKnown RBP12.29□□□□□ -0.44
USP6NL-206ENST00000609853 SPATA2LQ8IUW3 424 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF75CPQ92670 426 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-206ENST00000609853 CDKL2Q92772 493 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 HAPLN3Q96S86 360 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 FTHL17Q9BXU8 183 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 OR12D3Q9UGF7 316 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 INPP5FQ9Y2H2 1132 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 MFHAS1Q9Y4C4 1052 aa12.29□□□□□ -0.44
USP6NL-206ENST00000609853 CFAP73A6NFT4 308 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 OAZ2O95190 189 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 IL1BP01584 269 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 PGAM1P18669 254 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 DNAJB2P25686 324 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 DSC1Q08554 894 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 GALNT2Q10471 571 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 NFE2Q16621 373 aaPredicted RBP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 GALNTL6Q49A17 601 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 FYB2Q5VWT5 728 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 TRIM42Q8IWZ5 723 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 DCP1BQ8IZD4 617 aaKnown RBP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF567Q8N184 647 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 LZTR1Q8N653 840 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 SLC43A3Q8NBI5 491 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 OR10T2Q8NGX3 314 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 ADAM32Q8TC27 787 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 IQCGQ9H095 443 aaKnown RBP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 TKTL2Q9H0I9 626 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 PLAC1Q9HBJ0 212 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 USH1CQ9Y6N9 552 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 TRIM49D1C9J1S8 452 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 FAM72CH0Y354 149 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 I3L4J1 428 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 COPEO14579 308 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 PSMD3O43242 534 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 ADRA1DP25100 572 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 PTPN3P26045 913 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 CCNFP41002 786 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 SKIV2L2P42285 1042 aaKnown RBP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 NOMO2Q5JPE7 1267 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 SPDYAQ5MJ70 313 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 FAM72AQ5TYM5 149 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 FAM72DQ6L9T8 149 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 CGB2Q6NT52 195 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 MARK2Q7KZI7 788 aaKnown RBP12.28□□□□□ -0.44
USP6NL-206ENST00000609853 PID1Q7Z2X4 250 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 TAC4Q86UU9 113 aa12.28□□□□□ -0.44
USP6NL-206ENST00000609853 FAM72BQ86X60 149 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms