RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 WASP42768 502 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 GOLGA8FQ08AF8 430 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 GOLGA8DPQ0D2H9 430 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 ADIGQ0VDE8 80 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 CAMK2BQ13554 666 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 SMAD1Q15797 465 aaKnown RBP20.06■□□□□ 0.8
SGMS1-208ENST00000608287 STX1AQ16623 288 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 PKDCCQ504Y2 493 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 TCP11X2Q5H9J9 407 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 MIIPQ5JXC2 388 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 EGFLAMQ63HQ2 1017 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 SIX6OS1Q8N1H7 587 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 DNAJC17Q9NVM6 304 aaKnown RBP20.06■□□□□ 0.8
SGMS1-208ENST00000608287 CLIC5Q9NZA1 410 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 DNMT3LQ9UJW3 386 aa20.06■□□□□ 0.8
SGMS1-208ENST00000608287 C1QL1O75973 258 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 LCP1P13796 627 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 EEF1GP26641 437 aaKnown RBP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 MAOBP27338 520 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 GRK6P43250 576 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 RGS7P49802 495 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 YWHAGP61981 247 aaKnown RBP eCLIP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 HLA-BQ31612 363 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 C6orf118Q5T5N4 469 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 KLHDC10Q6PID8 442 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 C11orf57Q6ZUT1 292 aaPredicted RBP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 TMPRSS12Q86WS5 348 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 BAP1Q92560 729 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 NDRG1Q92597 394 aaKnown RBP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 WBP2Q969T9 261 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 TOE1Q96GM8 510 aaKnown RBP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 CDK5RAP1Q96SZ6 601 aaKnown RBP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 KLF16Q9BXK1 252 aaPredicted RBP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 PCED1AQ9H1Q7 454 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 CD248Q9HCU0 757 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 WSB2Q9NYS7 404 aaPredicted RBP20.05■□□□□ 0.8
SGMS1-208ENST00000608287 WDR35Q9P2L0 1181 aa20.05■□□□□ 0.8
SGMS1-208ENST00000608287 TEX51A0A1B0GUA7 166 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 CACNG3O60359 315 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 LETM1O95202 739 aaPredicted RBP20.04■□□□□ 0.8
SGMS1-208ENST00000608287 TEAD4Q15561 434 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 PM20D1Q6GTS8 502 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 MIB1Q86YT6 1006 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 BBS7Q8IWZ6 715 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 ZNF276Q8N554 614 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 SLC35F5Q8WV83 523 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 KCTD13Q8WZ19 329 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 PRORYQ9H606 182 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 SIX2Q9NPC8 291 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 TAB2Q9NYJ8 693 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 TMEM63CQ9P1W3 806 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 RASAL2Q9UJF2 1139 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 LSM7Q9UK45 103 aaKnown RBP20.04■□□□□ 0.8
SGMS1-208ENST00000608287 FNDC3AQ9Y2H6 1198 aaKnown RBP20.04■□□□□ 0.8
SGMS1-208ENST00000608287 CELSR3Q9NYQ7 3312 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 KNTC1P50748 2209 aa20.04■□□□□ 0.8
SGMS1-208ENST00000608287 GOLGA8CPA6NN73 597 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 J3QKU1 62 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 PIK3R2O00459 728 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 THAP12O43422 761 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 MED7O43513 233 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 GNA15P30679 374 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 AFF3P51826 1226 aaKnown RBP20.03■□□□□ 0.8
SGMS1-208ENST00000608287 EFEMP1Q12805 493 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 DCAF12L1Q5VU92 463 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 PMF1Q6P1K2 205 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 RSRC2Q7L4I2 434 aaKnown RBP20.03■□□□□ 0.8
SGMS1-208ENST00000608287 CRELD1Q96HD1 420 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 GPR174Q9BXC1 333 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 USP36Q9P275 1121 aaKnown RBP20.03■□□□□ 0.8
SGMS1-208ENST00000608287 DNAJC12Q9UKB3 198 aa20.03■□□□□ 0.8
SGMS1-208ENST00000608287 NAV2Q8IVL1 2488 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 METTL12A8MUP2 240 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 BECN2A8MW95 431 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 CDKAL1Q5VV42 579 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 HTR3DQ70Z44 454 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 BHLHA9Q7RTU4 235 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 ZNF606Q8WXB4 792 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 SHC3Q92529 594 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 FCRL3Q96P31 734 aaPredicted RBP20.02■□□□□ 0.8
SGMS1-208ENST00000608287 BBS2Q9BXC9 721 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 VPS16Q9H269 839 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 IL21RQ9HBE5 538 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 ACP6Q9NPH0 428 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 CNGB3Q9NQW8 809 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 ITM2CQ9NQX7 267 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 FANCLQ9NW38 375 aa20.02■□□□□ 0.8
SGMS1-208ENST00000608287 AJAP1Q9UKB5 411 aaPredicted RBP20.02■□□□□ 0.8
SGMS1-208ENST00000608287 CABIN1Q9Y6J0 2220 aa20.02■□□□□ 0.79
SGMS1-208ENST00000608287 NEDD8-MDP1E9PL57 170 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 TPM2P07951 284 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 EIF2S3P41091 472 aaKnown RBP20.01■□□□□ 0.79
SGMS1-208ENST00000608287 DGKGP49619 791 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 CCT8P50990 548 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 DAOAP59103 153 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 MYL5Q02045 173 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 TYRO3Q06418 890 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 CAVIN1Q6NZI2 390 aaKnown RBP20.01■□□□□ 0.79
SGMS1-208ENST00000608287 DENND1BQ6P3S1 775 aa20.01■□□□□ 0.79
SGMS1-208ENST00000608287 TMEM25Q86YD3 366 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms