RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ANKRD6	Q9Y2G4	727 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	C10orf142	B7Z368	130 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	MSI1	O43347	362 aa	Known RBP	21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	ZNF202	O95125	648 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	SEMA4F	O95754	770 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	DLD	P09622	509 aa	Known RBP	21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	EPB41	P11171	864 aa	Known RBP	21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	PABPC1	P11940	636 aa	Known RBP	21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	FAM133B	Q5BKY9	247 aa	Known RBP	21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	PIK3R6	Q5UE93	754 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	MBLAC2	Q68D91	279 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	UBA3	Q8TBC4	463 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	RNF139	Q8WU17	664 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	BTBD1	Q9H0C5	482 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	HESX1	Q9UBX0	185 aa		21.89	■■□□□ 1.09
NECAB3-222	ENST00000607805	PAPSS1	O43252	624 aa	Predicted RBP	21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	PCDHGA12	O60330	932 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	SETSIP	P0DME0	302 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	VDR	P11473	427 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	CD70	P32970	193 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	CAMK2B	Q13554	666 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	COBLL1	Q53SF7	1204 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	KCNT1	Q5JUK3	1230 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	C19orf48	Q6RUI8	117 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	LCLAT1	Q6UWP7	414 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	SLC35F5	Q8WV83	523 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	SNX19	Q92543	992 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	IGSF8	Q969P0	613 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	IPO9	Q96P70	1041 aa	Known RBP	21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	KIAA1257	Q9ULG3	409 aa		21.88	■■□□□ 1.09
NECAB3-222	ENST00000607805	SLC16A3	O15427	465 aa	Known RBP	21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	CD27	P26842	260 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	SLC6A4	P31645	630 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	PRCP	P42785	496 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	CTSK	P43235	329 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	SUZ12	Q15022	739 aa	Known RBP	21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	RFWD3	Q6PCD5	774 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	TFAP2B	Q92481	460 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	AZIN2	Q96A70	460 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	TTC17	Q96AE7	1141 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	ZSWIM1	Q9BR11	485 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	RSPH9	Q9H1X1	276 aa	Predicted RBP	21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	SGK2	Q9HBY8	427 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	SUN2	Q9UH99	717 aa		21.87	■■□□□ 1.09
NECAB3-222	ENST00000607805	SETX	Q7Z333	2677 aa	Known RBP	21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	GOLGA6L7	A0A1B0GV03	622 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	IGHV4-34	P06331	123 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	ATP5B	P06576	529 aa	Known RBP	21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	CD19	P15391	556 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	TEAD4	Q15561	434 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	COL28A1	Q2UY09	1125 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	SOWAHC	Q53LP3	525 aa	Predicted RBP	21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	PMF1	Q6P1K2	205 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	PDZD3	Q86UT5	571 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	SIX6OS1	Q8N1H7	587 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	IRGQ	Q8WZA9	623 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	GOLGA1	Q92805	767 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	SLC35C1	Q96A29	364 aa		21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	INTS6	Q9UL03	887 aa	Known RBP	21.86	■■□□□ 1.09
NECAB3-222	ENST00000607805	CFAP46	Q8IYW2	2715 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	TDRD6	O60522	2096 aa	Known RBP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805		H0Y8X5	98 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	KCNK3	O14649	394 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	TNFSF14	O43557	240 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	DNTT	P04053	509 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	POLR2E	P19388	210 aa	Known RBP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	PMS1	P54277	932 aa	Known RBP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	YWHAE	P62258	255 aa	Known RBP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	ARID5B	Q14865	1188 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	SMAD1	Q15797	465 aa	Known RBP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	TCERG1L	Q5VWI1	586 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	ZNF776	Q68DI1	518 aa	Predicted RBP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	NADSYN1	Q6IA69	706 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	LAYN	Q6UX15	382 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	USP30	Q70CQ3	517 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	MARCH9	Q86YJ5	346 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	FIBIN	Q8TAL6	211 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	MRGPRX3	Q96LB0	322 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	SCAND2P	Q9GZW5	306 aa	Predicted RBP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	MTG2	Q9H4K7	406 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	SCUBE2	Q9NQ36	999 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	RAX	Q9Y2V3	346 aa		21.85	■■□□□ 1.09
NECAB3-222	ENST00000607805	IRAK2	O43187	625 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	ACSL4	O60488	711 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	TBL1X	O60907	577 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	FSBP	O95073	299 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	PAEP	P09466	180 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	LCP1	P13796	627 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	TBXAS1	P24557	533 aa	Predicted RBP	21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	GRK6	P43250	576 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	FKBP3	Q00688	224 aa	Known RBP	21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	PNOC	Q13519	176 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	TTC31	Q49AM3	519 aa	Predicted RBP	21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	DCAF17	Q5H9S7	520 aa	Predicted RBP	21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	NUGGC	Q68CJ6	796 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	ANKRD40	Q6AI12	368 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	UNC45B	Q8IWX7	931 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	MYEOV	Q96EZ4	313 aa		21.84	■■□□□ 1.09
NECAB3-222	ENST00000607805	PRICKLE1	Q96MT3	831 aa	Predicted RBP	21.84	■■□□□ 1.09

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms