RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SH3BP5O60239 455 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 AFPP02771 609 aaKnown RBP17.65■□□□□ 0.42
SCAF1-204ENST00000601038 POLR2EP19388 210 aaKnown RBP17.65■□□□□ 0.42
SCAF1-204ENST00000601038 CD70P32970 193 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 ACADSBP45954 432 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 STX17P56962 302 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 ZBTB16Q05516 673 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 PAK1Q13153 545 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 NNTQ13423 1086 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 NADSYN1Q6IA69 706 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 FAM124AQ86V42 546 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 ZNF366Q8N895 744 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 C1orf216Q8TAB5 229 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 FIBINQ8TAL6 211 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 DQX1Q8TE96 717 aaKnown RBP17.65■□□□□ 0.42
SCAF1-204ENST00000601038 STK32AQ8WU08 396 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 LMLNQ96KR4 655 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 FCRL2Q96LA5 508 aaPredicted RBP17.65■□□□□ 0.42
SCAF1-204ENST00000601038 SERPINB11Q96P15 392 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 SRRTQ9BXP5 876 aaKnown RBP17.65■□□□□ 0.42
SCAF1-204ENST00000601038 INTS2Q9H0H0 1204 aaKnown RBP17.65■□□□□ 0.42
SCAF1-204ENST00000601038 SUN2Q9UH99 717 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 EIF2B4Q9UI10 523 aaKnown RBP17.65■□□□□ 0.42
SCAF1-204ENST00000601038 TLR6Q9Y2C9 796 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 MSRB2Q9Y3D2 182 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 ACSL1P33121 698 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 TRIP6Q15654 476 aaKnown RBP17.64■□□□□ 0.41
SCAF1-204ENST00000601038 MEA1Q16626 185 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 ZNF423Q2M1K9 1284 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 IL27RAQ6UWB1 636 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 BEND5Q7L4P6 421 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 MFN1Q8IWA4 741 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 HJURPQ8NCD3 748 aaPredicted RBP17.64■□□□□ 0.41
SCAF1-204ENST00000601038 TTC17Q96AE7 1141 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 FAM149B1Q96BN6 582 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 SLC39A13Q96H72 371 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 CAMK1GQ96NX5 476 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 TRIM62Q9BVG3 475 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 UBE2TQ9NPD8 197 aaPredicted RBP17.64■□□□□ 0.41
SCAF1-204ENST00000601038 ST7Q9NRC1 585 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 STIM2Q9P246 746 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 ZMIZ1Q9ULJ6 1067 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 NAALADL1Q9UQQ1 740 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 PCDHB9Q9Y5E1 797 aa17.64■□□□□ 0.41
SCAF1-204ENST00000601038 TYW5A2RUC4 315 aaKnown RBP17.63■□□□□ 0.41
SCAF1-204ENST00000601038 MED7O43513 233 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 FGFR1OPO95684 399 aaKnown RBP17.63■□□□□ 0.41
SCAF1-204ENST00000601038 ZNF883P0CG24 379 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 KRT5P13647 590 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 RPS14P62263 151 aaKnown RBP17.63■□□□□ 0.41
SCAF1-204ENST00000601038 NAXDQ8IW45 347 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 ZNF606Q8WXB4 792 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 PRICKLE1Q96MT3 831 aaPredicted RBP17.63■□□□□ 0.41
SCAF1-204ENST00000601038 SLC4A5Q9BY07 1137 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 BTBD1Q9H0C5 482 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 C6orf106Q9H6K1 298 aaPredicted RBP17.63■□□□□ 0.41
SCAF1-204ENST00000601038 GAREM1Q9H706 876 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 NUMA1Q14980 2115 aa17.63■□□□□ 0.41
SCAF1-204ENST00000601038 MUC22E2RYF6 1773 aaPredicted RBP17.63■□□□□ 0.41
SCAF1-204ENST00000601038 FAM221BA6H8Z2 402 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
SCAF1-204ENST00000601038 CER1O95813 267 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 DNTTP04053 509 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 ASLP04424 464 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 MATKP42679 507 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 RPS24P62847 133 aaKnown RBP17.62■□□□□ 0.41
SCAF1-204ENST00000601038 BNC1Q01954 994 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 MS4A13Q5J8X5 152 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 SYPL2Q5VXT5 272 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 DENND1BQ6P3S1 775 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 ENOSF1Q7L5Y1 443 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 RAB44Q7Z6P3 723 aaPredicted RBP17.62■□□□□ 0.41
SCAF1-204ENST00000601038 TMEM110Q86TL2 294 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 MYEOVQ96EZ4 313 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 MYO19Q96H55 970 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 NUCKS1Q9H1E3 243 aaKnown RBP17.62■□□□□ 0.41
SCAF1-204ENST00000601038 KLK13Q9UKR3 277 aa17.62■□□□□ 0.41
SCAF1-204ENST00000601038 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.62■□□□□ 0.41
SCAF1-204ENST00000601038 CAPN9O14815 690 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 PAPSS1O43252 624 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 CBFA2T3O75081 653 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 LETM1O95202 739 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 SEMA4FO95754 770 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 CSKP41240 450 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 CSNK1EP49674 416 aaKnown RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 AFF3P51826 1226 aaKnown RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 ST8SIA6P61647 398 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 CDH18Q13634 790 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 HLA-BQ31612 363 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 TTC31Q49AM3 519 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 ZNF776Q68DI1 518 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 TAC4Q86UU9 113 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 CCDC117Q8IWD4 279 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 CARNMT1Q8N4J0 409 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 CHCHD4Q8N4Q1 142 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 KDM1BQ8NB78 822 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 ADAM32Q8TC27 787 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 SNX19Q92543 992 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 FAM81BQ96LP2 452 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 MED15Q96RN5 788 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms