RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SYCE1Q8N0S2 351 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 USP13Q92995 863 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 CLDN23Q96B33 292 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 SHDQ96IW2 340 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 OSBPL6Q9BZF3 934 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 PIGVQ9NUD9 493 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 CALCOCO1Q9P1Z2 691 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 TRIM10Q9UDY6 481 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 GUCA1BQ9UMX6 200 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 CPQQ9Y646 472 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 ALG6Q9Y672 507 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 DOCK4Q8N1I0 1966 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 MACROD2A1Z1Q3 448 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 LEFTY2O00292 366 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 MDM4O15151 490 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 LAMTOR5O43504 91 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 ECI2O75521 394 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 PRAMEF12O95522 483 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 APOEP02649 317 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 MIPP30301 263 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 HARS2P49590 506 aaKnown RBP12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 NRG1Q02297 640 aaPredicted RBP12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 SLC25A11Q02978 314 aaKnown RBP12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 MESDQ14696 234 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 ARL13BQ3SXY8 428 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 BOLA3Q53S33 107 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 TANGO2Q6ICL3 276 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 TPRG1Q6ZUI0 275 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 MTSS1LQ765P7 747 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 MIB1Q86YT6 1006 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 ADAM32Q8TC27 787 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 TEKT4Q8WW24 435 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 CD101Q93033 1021 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 ELSPBP1Q96BH3 223 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 OTUB2Q96DC9 234 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 BTBD6Q96KE9 485 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 BTN2A3PQ96KV6 586 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 C1orf74Q96LT6 269 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 HAPLN3Q96S86 360 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 EPC1Q9H2F5 836 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 WDCPQ9H6R7 721 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 ZFP14Q9HCL3 533 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 PRMT8Q9NR22 394 aaPredicted RBP12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 HEBP1Q9NRV9 189 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 SLC12A6Q9UHW9 1150 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 LSM7Q9UK45 103 aaKnown RBP12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 USP18Q9UMW8 372 aa12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 SMG5Q9UPR3 1016 aaKnown RBP12.07□□□□□ -0.48
CHMP2A-207ENST00000600804 SLC9A3R1O14745 358 aaPredicted RBP12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 MSI1O43347 362 aaKnown RBP12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 PSTPIP1O43586 416 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 BUB1O43683 1085 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 ADRA1BP35368 520 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 ZNF135P52742 658 aaPredicted RBP12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 FCHO2Q0JRZ9 810 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 MTAPQ13126 283 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 NME3Q13232 169 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 HADHQ16836 314 aaKnown RBP12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 CDO1Q16878 200 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 ZC3H12AQ5D1E8 599 aaKnown RBP12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 SH3PXD2AQ5TCZ1 1133 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 CYP4V2Q6ZWL3 525 aaPredicted RBP12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 DAAM2Q86T65 1068 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 VSIG1Q86XK7 387 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 ATP6V0D2Q8N8Y2 350 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 SH3RF2Q8TEC5 729 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 DEPDC1BQ8WUY9 529 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 ALS2CR12Q96Q35 445 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 OSBPL2Q9H1P3 480 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 LZTFL1Q9NQ48 299 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 GKN1Q9NS71 199 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 TBC1D14Q9P2M4 693 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 CCL26Q9Y258 94 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 PCDHGA2Q9Y5H1 932 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 CAPN6Q9Y6Q1 641 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 ZZEF1O43149 2961 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 MYOFQ9NZM1 2061 aa12.06□□□□□ -0.48
CHMP2A-207ENST00000600804 MIF4GDA9UHW6 222 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 ZNF487B1APH4 448 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 GFRA2O00451 464 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 PRPSAP2O60256 369 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 KIF5CO60282 957 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 PALMO75781 387 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 MOCS3O95396 460 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 KLKB1P03952 638 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 KRT7P08729 469 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 COMTP21964 271 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 MSNP26038 577 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 CORO1AP31146 461 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 HTR7P34969 479 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 SLC11A2P49281 568 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 MLLT6P55198 1093 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 NAP1L1P55209 391 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 ADGRF1Q5T601 910 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 ERMARDQ5T6L9 678 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms