RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 GPS2Q13227 327 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PDK1Q15118 436 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PLPP4Q5VZY2 271 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 CYP4V2Q6ZWL3 525 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-210ENST00000600442 LZTR1Q8N653 840 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PLD5Q8N7P1 536 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 LEMD2Q8NC56 503 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 KREMEN2Q8NCW0 462 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
ZNF548-210ENST00000600442 CASP10Q92851 521 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PABPC5Q96DU9 382 aaKnown RBP13.18□□□□□ -0.3
ZNF548-210ENST00000600442 KCTD15Q96SI1 283 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PNKPQ96T60 521 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 LMAN2LQ9H0V9 348 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 CRISPLD1Q9H336 500 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 RETREG1Q9H6L5 497 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 GPATCH2LQ9NWQ4 482 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 CWC15Q9P013 229 aaKnown RBP13.18□□□□□ -0.3
ZNF548-210ENST00000600442 NR2E1Q9Y466 385 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 ZNF840PA6NDX5 716 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 KCNU1A8MYU2 1149 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 SMAPO00193 183 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 DCXO43602 365 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 VNN2O95498 520 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 C8AP07357 584 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 RBP3P10745 1247 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 GOT1P17174 413 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 EPHB2P29323 1055 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 TNNT3P45378 269 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-210ENST00000600442 ATXN1P54253 815 aaKnown RBP13.17□□□□□ -0.3
ZNF548-210ENST00000600442 NRG1Q02297 640 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-210ENST00000600442 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 PTK6Q13882 451 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 NOMO1Q15155 1222 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 TCEAL5Q5H9L2 206 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 OTUD1Q5VV17 481 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-210ENST00000600442 RWDD4Q6NW29 188 aaKnown RBP13.17□□□□□ -0.3
ZNF548-210ENST00000600442 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 HDXQ7Z353 690 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 MIB1Q86YT6 1006 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 PCDH19Q8TAB3 1148 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 SLC35B2Q8TB61 432 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 TBC1D31Q96DN5 1066 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 SNF8Q96H20 258 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 PKNOX2Q96KN3 472 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 SIK2Q9H0K1 926 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 WHRNQ9P202 907 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 SFMBT1Q9UHJ3 866 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 DMGDHQ9UI17 866 aaKnown RBP13.17□□□□□ -0.3
ZNF548-210ENST00000600442 ZMYM5Q9UJ78 669 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 DNPEPQ9ULA0 475 aa13.17□□□□□ -0.3
ZNF548-210ENST00000600442 R3HDM2Q9Y2K5 976 aaKnown RBP13.17□□□□□ -0.3
ZNF548-210ENST00000600442 TECTAO75443 2155 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 PAGE1O75459 146 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 KRT14P02533 472 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZNF548-210ENST00000600442 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 IL4RP24394 825 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 PTGIRP43119 386 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 KCNJ1P48048 391 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 PITX1P78337 314 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-210ENST00000600442 ZP2Q05996 745 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 CA9Q16790 459 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 ARHGAP15Q53QZ3 475 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 LILRA6Q6PI73 481 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 LRRC49Q8IUZ0 686 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 ALLCQ8N6M5 410 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 TFB1MQ8WVM0 346 aaKnown RBP13.16□□□□□ -0.3
ZNF548-210ENST00000600442 SEC14L1Q92503 715 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 FCRL2Q96LA5 508 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-210ENST00000600442 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 EPC1Q9H2F5 836 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 NSUN3Q9H649 340 aaKnown RBP13.16□□□□□ -0.3
ZNF548-210ENST00000600442 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 ARHGEF4Q9NR80 690 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 HAUS2Q9NVX0 235 aa13.16□□□□□ -0.3
ZNF548-210ENST00000600442 BCLAF3A2AJT9 711 aaKnown RBP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 ZMYND10O75800 440 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 MOCS2O96007 188 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 IFNB1P01574 187 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 DDX6P26196 483 aaKnown RBP eCLIP13.15□□□□□ -0.3
ZNF548-210ENST00000600442 HOXA9P31269 272 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 CLCN6P51797 869 aa13.15□□□□□ -0.3
ZNF548-210ENST00000600442 MLLT6P55198 1093 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms