RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ERMARDQ5T6L9 678 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 MANEALQ5VSG8 457 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 CCAR2Q8N163 923 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 C17orf53Q8N3J3 647 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 BHMTQ93088 406 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 CHFRQ96EP1 664 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 C1orf74Q96LT6 269 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 KCTD15Q96SI1 283 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 UHRF1Q96T88 793 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 DDX50Q9BQ39 737 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 DHX35Q9H5Z1 703 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 KLHL11Q9NVR0 708 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 PLK2Q9NYY3 685 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 MARK1Q9P0L2 795 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 MUTYHQ9UIF7 546 aa20.69■□□□□ 0.9
SHKBP1-222ENST00000600320 F5H5T6 163 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 SPOPO43791 374 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 TNNT1P13805 278 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 SOX9P48436 509 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 SEMA3BQ13214 749 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 BOLA3Q53S33 107 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 FYB2Q5VWT5 728 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 CFAP52Q8N1V2 620 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 CPA6Q8N4T0 437 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 KIAA1524Q8TCG1 905 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 TEKT4Q8WW24 435 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 HSPH1Q92598 858 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 DNASE1L2Q92874 299 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 CD101Q93033 1021 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 TRPV5Q9NQA5 729 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 NEU3Q9UQ49 428 aa20.68■□□□□ 0.9
SHKBP1-222ENST00000600320 E9PAM4 449 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 HOXC11O43248 304 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 LRIG2O94898 1065 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 FTCDO95954 541 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 PENKP01210 267 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 ADH5P11766 374 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 L1CAMP32004 1257 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 MARCKSL1P49006 195 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 ARSEP51690 589 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 NRG1Q02297 640 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 ANO4Q32M45 955 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 ITPRIPL2Q3MIP1 535 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 C5orf22Q49AR2 442 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 MPPE1Q53F39 396 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 NAIF1Q69YI7 327 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 NT5DC3Q86UY8 548 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 C12orf40Q86WS4 652 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 CIR1Q86X95 450 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 CSGALNACT1Q8TDX6 532 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 KRT35Q92764 455 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 TMA16Q96EY4 203 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 BBS2Q9BXC9 721 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 OR12D3Q9UGF7 316 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 CLEC4EQ9ULY5 219 aa20.67■□□□□ 0.9
SHKBP1-222ENST00000600320 NEDD8-MDP1E9PL57 170 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 TBL1XO60907 577 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 SRGAP2O75044 1071 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 CNTN5O94779 1100 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 ADH1CP00326 375 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 HOXD9P28356 352 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 GJA4P35212 333 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 GAD2Q05329 585 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 ALFQ53S48 1182 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 PSTKQ8IV42 348 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 RHOT1Q8IXI2 618 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 HJURPQ8NCD3 748 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 DDI1Q8WTU0 396 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 RPRD1AQ96P16 312 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 PCDH18Q9HCL0 1135 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 HEBP1Q9NRV9 189 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 STIM2Q9P246 746 aa20.66■□□□□ 0.9
SHKBP1-222ENST00000600320 IGLV3-10A0A075B6K4 115 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 DRGXA6NNA5 263 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 CREB3O43889 395 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 KRT7P08729 469 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 CD48P09326 243 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 TYRP14679 529 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 PFKPQ01813 784 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 DPYSL2Q16555 572 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 LRRC38Q5VT99 294 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 POLNQ7Z5Q5 900 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 SYCE1Q8N0S2 351 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 NAT16Q8N8M0 369 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 RAPGEF5Q92565 580 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 MPP6Q9NZW5 540 aa20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 PACSIN2Q9UNF0 486 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-222ENST00000600320 SHISA7A6NL88 538 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 PSTPIP1O43586 416 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 CYBBP04839 570 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 OPRD1P41143 372 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 SLC6A11P48066 632 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 NR1H3Q13133 447 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 HS1BP3Q53T59 392 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 PPP6R3Q5H9R7 873 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 ACBD5Q5T8D3 534 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 RNF43Q68DV7 783 aa20.64■□□□□ 0.89
SHKBP1-222ENST00000600320 LRRC31Q6UY01 552 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms