RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CD93Q9NPY3 652 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 ASNSD1Q9NWL6 643 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 SUN2Q9UH99 717 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 ATXN2Q99700 1313 aaKnown RBP16.4■□□□□ 0.22
VRK3-221ENST00000600284 KCNJ18B7U540 433 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 ARHGAP33O14559 1287 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 IGLV3-25P01717 112 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 APOEP02649 317 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 ASLP04424 464 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 SYPP08247 313 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 GNSP15586 552 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 ATXN3P54252 364 aaPredicted RBP16.39■□□□□ 0.21
VRK3-221ENST00000600284 SHC2P98077 582 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 ZBTB16Q05516 673 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 EIF4EBP2Q13542 120 aaPredicted RBP16.39■□□□□ 0.21
VRK3-221ENST00000600284 MS4A13Q5J8X5 152 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 EFHC1Q5JVL4 640 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 SH3PXD2AQ5TCZ1 1133 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 TAC4Q86UU9 113 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 RGL4Q8IZJ4 473 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 WDTC1Q8N5D0 677 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 KDM1BQ8NB78 822 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 WFDC5Q8TCV5 224 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 BTN2A3PQ96KV6 586 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 NOX5Q96PH1 765 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 PCED1AQ9H1Q7 454 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 NDST4Q9H3R1 872 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.39■□□□□ 0.21
VRK3-221ENST00000600284 SLC12A6Q9UHW9 1150 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 ANGPTL2Q9UKU9 493 aa16.39■□□□□ 0.21
VRK3-221ENST00000600284 TRUB2O95900 331 aaKnown RBP16.38■□□□□ 0.21
VRK3-221ENST00000600284 SLC2A3P11169 496 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 HLA-EP13747 358 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 CD70P32970 193 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 BPIFB4P59827 614 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 APBA1Q02410 837 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 MTA1Q13330 715 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 UAP1L1Q3KQV9 507 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 ATP6V0D2Q8N8Y2 350 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 ADAM32Q8TC27 787 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 CYB5D2Q8WUJ1 264 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 PRICKLE1Q96MT3 831 aaPredicted RBP16.38■□□□□ 0.21
VRK3-221ENST00000600284 TUBGCP2Q9BSJ2 902 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 GPR174Q9BXC1 333 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 SLC32A1Q9H598 525 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 STIM2Q9P246 746 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 DNAJC12Q9UKB3 198 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 CEP192Q8TEP8 1941 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 CKAP5Q14008 2032 aa16.38■□□□□ 0.21
VRK3-221ENST00000600284 PI4KAP42356 2102 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 METTL12A8MUP2 240 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 MEI4A8MW99 385 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 FOXN3O00409 490 aaPredicted RBP16.37■□□□□ 0.21
VRK3-221ENST00000600284 KRT9P35527 623 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 MAPK8P45983 427 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 ST8SIA6P61647 398 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 RPS24P62847 133 aaKnown RBP16.37■□□□□ 0.21
VRK3-221ENST00000600284 CDK17Q00537 523 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 SEMA3BQ13214 749 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 CDH18Q13634 790 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 ARID5BQ14865 1188 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 DPCR1Q3MIW9 517 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 DCAF6Q58WW2 860 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 ZC3H12AQ5D1E8 599 aaKnown RBP16.37■□□□□ 0.21
VRK3-221ENST00000600284 HDDC3Q8N4P3 179 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 SLC2A13Q96QE2 648 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 CPXM1Q96SM3 734 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 ZDHHC5Q9C0B5 715 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 NUCKS1Q9H1E3 243 aaKnown RBP16.37■□□□□ 0.21
VRK3-221ENST00000600284 PRSS16Q9NQE7 514 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 DNAAF2Q9NVR5 837 aaKnown RBP16.37■□□□□ 0.21
VRK3-221ENST00000600284 KIAA1522Q9P206 1035 aaPredicted RBP16.37■□□□□ 0.21
VRK3-221ENST00000600284 TJP2Q9UDY2 1190 aa16.37■□□□□ 0.21
VRK3-221ENST00000600284 A0A1B0GTW7 788 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 KCNU1A8MYU2 1149 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 OPHN1O60890 802 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 HSF2BPO75031 334 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 LUC7L3O95232 432 aaKnown RBP16.36■□□□□ 0.21
VRK3-221ENST00000600284 MOCS3O95396 460 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 MOCS2O96007 188 aaPredicted RBP16.36■□□□□ 0.21
VRK3-221ENST00000600284 ABCB4P21439 1286 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 CLCN1P35523 988 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 SLC14A1Q13336 389 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 PLEKHG6Q3KR16 790 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 MIIPQ5JXC2 388 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 C11orf57Q6ZUT1 292 aaPredicted RBP16.36■□□□□ 0.21
VRK3-221ENST00000600284 PIP4P1Q86T03 277 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 FAM71AQ8IYT1 594 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 CARNMT1Q8N4J0 409 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 MINDY1Q8N5J2 469 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 MYEOVQ96EZ4 313 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 GTPBP2Q9BX10 602 aaKnown RBP16.36■□□□□ 0.21
VRK3-221ENST00000600284 INTS6Q9UL03 887 aaKnown RBP16.36■□□□□ 0.21
VRK3-221ENST00000600284 SCML1Q9UN30 329 aa16.36■□□□□ 0.21
VRK3-221ENST00000600284 CEP83Q9Y592 693 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms