RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 MPP7Q5T2T1 576 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 C9orf64Q5T6V5 341 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 BSPRYQ5W0U4 402 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 CEP135Q66GS9 1140 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 KIAA0895LQ68EN5 471 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 NADSYN1Q6IA69 706 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 MSANTD2Q6P1R3 559 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 FBXL19Q6PCT2 694 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 USP30Q70CQ3 517 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 GATAD2AQ86YP4 633 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 FMNL3Q8IVF7 1028 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 CACTIN-AS1Q8N1I8 211 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 SCML4Q8N228 414 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 ARHGAP18Q8N392 663 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 UBR7Q8N806 425 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 SPRYD3Q8NCJ5 442 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 SNX19Q92543 992 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 COL26A1Q96A83 441 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 UBL7Q96S82 380 aaPredicted RBP6.37□□□□□ -1.39
VRK3-220ENST00000600259 ELF4Q99607 663 aaPredicted RBP6.37□□□□□ -1.39
VRK3-220ENST00000600259 IRX2Q9BZI1 471 aaPredicted RBP6.37□□□□□ -1.39
VRK3-220ENST00000600259 NEUROG2Q9H2A3 272 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 FBRSQ9HAH7 460 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 UPF2Q9HAU5 1272 aaKnown RBP6.37□□□□□ -1.39
VRK3-220ENST00000600259 TMEM8AQ9HCN3 771 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 SUN2Q9UH99 717 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 ADAMTS1Q9UHI8 967 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 GGA2Q9UJY4 613 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 STRIP2Q9ULQ0 834 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 PLA2G4CQ9UP65 541 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 HPSEQ9Y251 543 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 COQ4Q9Y3A0 265 aa6.37□□□□□ -1.39
VRK3-220ENST00000600259 FAM237AA0A1B0GTK4 181 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 ENC1O14682 589 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 XPO1O14980 1071 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 ATXN7O15265 892 aaPredicted RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 MSI1O43347 362 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 CALUO43852 315 aaPredicted RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 SIN3BO75182 1162 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 RHOBTB3O94955 611 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 DNTTP04053 509 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FYNP06241 537 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 C1SP09871 688 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 JUPP14923 745 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 GTF2H1P32780 548 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 HARS2P49590 506 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 ACADVLP49748 655 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 CCR5P51681 352 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 BCAT1P54687 386 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 ZNF445P59923 1031 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 IL9RQ01113 521 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 BNIP3Q12983 259 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 TARDBPQ13148 414 aaKnown RBP eCLIP6.36□□□□□ -1.39
VRK3-220ENST00000600259 DNAJC3Q13217 504 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 ADAM9Q13443 819 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 HNRNPA1L2Q32P51 320 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 FNDC3BQ53EP0 1204 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 FSCBQ5H9T9 825 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 SFMBT2Q5VUG0 894 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FOXD4L5Q5VV16 416 aaPredicted RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 ZNF776Q68DI1 518 aaPredicted RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 RFWD3Q6PCD5 774 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 NCEH1Q6PIU2 408 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 INTS8Q75QN2 995 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 RSRC2Q7L4I2 434 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 FAM186BQ8IYM0 893 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 AHI1Q8N157 1196 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 GUF1Q8N442 669 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 KDM1BQ8NB78 822 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 LSM14AQ8ND56 463 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 FIBINQ8TAL6 211 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 PIP4K2CQ8TBX8 421 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 SLC35F5Q8WV83 523 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FOXD4L4Q8WXT5 416 aaPredicted RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 KCTD13Q8WZ19 329 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 SLC39A7Q92504 469 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 EDEM1Q92611 657 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 GOLGA1Q92805 767 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 AZIN2Q96A70 460 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FAM131CQ96AQ9 280 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 EEF2KMTQ96G04 330 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 SLC6A18Q96N87 628 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 ZSWIM1Q9BR11 485 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 NRSN2Q9GZP1 204 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 PABPC3Q9H361 631 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 OLA1Q9NTK5 396 aaKnown RBP6.36□□□□□ -1.39
VRK3-220ENST00000600259 EXOC1Q9NV70 894 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 RAB20Q9NX57 234 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FBXL12Q9NXK8 326 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 ARHGAP20Q9P2F6 1191 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FTSJ1Q9UET6 329 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 SLCO3A1Q9UIG8 710 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 SCML1Q9UN30 329 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 FRMD4BQ9Y2L6 1034 aa6.36□□□□□ -1.39
VRK3-220ENST00000600259 A0A1B0GVL5 298 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 TARSL2A2RTX5 802 aaKnown RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 CYSRT1A8MQ03 144 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 TTC34A8MYJ7 566 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms