RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CACNA1IQ9P0X4 2223 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 KMT2EQ8IZD2 1858 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 RCCD1A6NED2 376 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 DRGXA6NNA5 263 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 FAM72CH0Y354 149 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 NDUFA10O95299 355 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 EGFP01133 1207 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 UBXN2BQ14CS0 331 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 TMEM31Q5JXX7 168 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 FAM72AQ5TYM5 149 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 MANEALQ5VSG8 457 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 FAM72DQ6L9T8 149 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 FAM72BQ86X60 149 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 CPNE8Q86YQ8 564 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 LGI2Q8N0V4 545 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 CFAP52Q8N1V2 620 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 BHMTQ93088 406 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 RNF34Q969K3 372 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 NTAN1Q96AB6 310 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 PEBP4Q96S96 227 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 PNKPQ96T60 521 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 BAG1Q99933 345 aaPredicted RBP14.22□□□□□ -0.13
VRK3-219ENST00000600137 OSBPL2Q9H1P3 480 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 LMAN1LQ9HAT1 526 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 OSGEPQ9NPF4 335 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 ZNF212Q9UDV6 495 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 SLC12A6Q9UHW9 1150 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 SLC27A6Q9Y2P4 619 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 SIT1Q9Y3P8 196 aa14.22□□□□□ -0.13
VRK3-219ENST00000600137 IGLV3-10A0A075B6K4 115 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 PRRT4C9JH25 899 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 TBL1XO60907 577 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 LRCH4O75427 683 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 MTA2O94776 668 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 KAT7O95251 611 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 DCNP07585 359 aaKnown RBP14.21□□□□□ -0.13
VRK3-219ENST00000600137 TCF4P15884 667 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 PSMA2P25787 234 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 AVPR2P30518 371 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 MAGEA1P43355 309 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 MRE11P49959 708 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 AMPD2Q01433 879 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 NRG1Q02297 640 aaPredicted RBP14.21□□□□□ -0.13
VRK3-219ENST00000600137 SCAPQ12770 1279 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 C10orf76Q5T2E6 689 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 DAB2IPQ5VWQ8 1189 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 PKN3Q6P5Z2 889 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 SND1Q7KZF4 910 aaKnown RBP eCLIP14.21□□□□□ -0.13
VRK3-219ENST00000600137 CHSY1Q86X52 802 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 NIPA2Q8N8Q9 360 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 SLC35G2Q8TBE7 412 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 DDI1Q8WTU0 396 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 SLC2A11Q9BYW1 496 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 SIK2Q9H0K1 926 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 DEC1Q9P2X7 70 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 UVRAGQ9P2Y5 699 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 FZD10Q9ULW2 581 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 NEU3Q9UQ49 428 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 MRPS17Q9Y2R5 130 aaKnown RBP14.21□□□□□ -0.13
VRK3-219ENST00000600137 PCDHA13Q9Y5I0 950 aa14.21□□□□□ -0.13
VRK3-219ENST00000600137 CNTN5O94779 1100 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 DRD1P21728 446 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 IL1R2P27930 398 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 MIPP30301 263 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 HLA-FP30511 346 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 CYLC1P35663 651 aaPredicted RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 GRIA2P42262 883 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 RPS9P46781 194 aaKnown RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 SEMA3BQ13214 749 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 MTA1Q13330 715 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 ACAP1Q15027 740 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 FSCBQ5H9T9 825 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 EMC10Q5UCC4 262 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 TMEM215Q68D42 235 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 TXNRD3NBQ6F5E7 133 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 PYROXD2Q8N2H3 581 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.2□□□□□ -0.14
VRK3-219ENST00000600137 HJURPQ8NCD3 748 aaPredicted RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 OR52K2Q8NGK3 314 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 FIBINQ8TAL6 211 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 ZNF564Q8TBZ8 553 aaPredicted RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 CTNNBL1Q8WYA6 563 aaPredicted RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 PDLIM2Q96JY6 352 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 XPO6Q96QU8 1125 aaKnown RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 DDX50Q9BQ39 737 aaKnown RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 MFSD1Q9H3U5 465 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 ARHGEF4Q9NR80 690 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 DNAJC17Q9NVM6 304 aaKnown RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 C2orf42Q9NWW7 574 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 SALL4Q9UJQ4 1053 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 ANAPC7Q9UJX3 599 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 INTS6Q9UL03 887 aaKnown RBP14.2□□□□□ -0.14
VRK3-219ENST00000600137 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 PAXBP1Q9Y5B6 917 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 WDFY4Q6ZS81 3184 aa14.2□□□□□ -0.14
VRK3-219ENST00000600137 A0A0U1RQJ8 604 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 STK25O00506 426 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 CYBBP04839 570 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 PCK1P35558 622 aa14.19□□□□□ -0.14
VRK3-219ENST00000600137 KIR2DL1P43626 348 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms