RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 LRIG2O94898 1065 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 NFATC1O95644 943 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 PENKP01210 267 aaPredicted RBP13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 CYP17A1P05093 508 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 HOXC13P31276 330 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 PEX5P50542 639 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 SGSHP51688 502 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 VCPP55072 806 aaKnown RBP13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 TNK2Q07912 1038 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 TDGQ13569 410 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 DHCR24Q15392 516 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 LY6G5CQ5SRR4 150 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 FYB2Q5VWT5 728 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 TMEM25Q86YD3 366 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 KATNAL2Q8IYT4 538 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 LGI2Q8N0V4 545 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 TSC1Q92574 1164 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 ATP2A3Q93084 1043 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 IGSF8Q969P0 613 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 HES6Q96HZ4 224 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 EBF3Q9H4W6 596 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 DHX35Q9H5Z1 703 aaKnown RBP13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 PCDH18Q9HCL0 1135 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 VANGL2Q9ULK5 521 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 PCDHA3Q9Y5H8 950 aa13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 C3orf70A6NLC5 250 aaPredicted RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 MIF4GDA9UHW6 222 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 F5H5T6 163 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 TRDMT1O14717 391 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 DDX3YO15523 660 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 HOXC11O43248 304 aaPredicted RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 KIF5CO60282 957 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 TSPAN3O60637 253 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 SRFP11831 508 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 IL4RP24394 825 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 HTR7P34969 479 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 DEKP35659 375 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 GJC1P36383 396 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 HCAR3P49019 387 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 IRAK1P51617 712 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 ZNF135P52742 658 aaPredicted RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 RPS24P62847 133 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 RUNX3Q13761 415 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 TAZQ16635 292 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 MPPE1Q53F39 396 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 MPP7Q5T2T1 576 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 MEI1Q5TIA1 1274 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 VSIG1Q86XK7 387 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 HJURPQ8NCD3 748 aaPredicted RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 RAPGEF5Q92565 580 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 HSPH1Q92598 858 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 ALG3Q92685 438 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 TMA16Q96EY4 203 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 EPAS1Q99814 870 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 BRD9Q9H8M2 597 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 CD320Q9NPF0 282 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 SLC2A4RGQ9NR83 387 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 PPARGC1AQ9UBK2 798 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 ZNF212Q9UDV6 495 aa13.06□□□□□ -0.32
CHMP2A-206ENST00000600118 ZNF487B1APH4 448 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 NARSO43776 548 aaKnown RBP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 ADH1CP00326 375 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 CD48P09326 243 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 TNNT1P13805 278 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 HOXD9P28356 352 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 CDH6P55285 790 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 DPYSL3Q14195 570 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 PDK2Q15119 407 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 ZNF569Q5MCW4 686 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 RABGAP1LQ5R372 815 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 TTC39BQ5VTQ0 682 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 LRRC31Q6UY01 552 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 TPGS1Q6ZTW0 290 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 RNF135Q8IUD6 432 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 GJD3Q8N144 294 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 SLC35F6Q8N357 371 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 CPA6Q8N4T0 437 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 DNASE1L2Q92874 299 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 FAF2Q96CS3 445 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 TBC1D31Q96DN5 1066 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 CHFRQ96EP1 664 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 RPRD1AQ96P16 312 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 ZNF670Q9BS34 389 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 TLR10Q9BXR5 811 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 RETREG1Q9H6L5 497 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 KLHL11Q9NVR0 708 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 GTSE1Q9NYZ3 720 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 CWC15Q9P013 229 aaKnown RBP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 RCOR3Q9P2K3 495 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 PACSIN2Q9UNF0 486 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 DUSP12Q9UNI6 340 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms