RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	ITGB3	P05106	788 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IL32	P24001	234 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	VARS	P26640	1264 aa	Known RBP	11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LRPAP1	P30533	357 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PTGIR	P43119	386 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IKBKE	Q14164	716 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SURF1	Q15526	300 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	AMHR2	Q16671	573 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C21orf62-AS1	Q17RA5	79 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SMTNL2	Q2TAL5	461 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NEPRO	Q6NW34	567 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CD302	Q8IX05	232 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IRGQ	Q8WZA9	623 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CD101	Q93033	1021 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RUNDC3B	Q96NL0	473 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GBA3	Q9H227	469 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KCNK9	Q9NPC2	374 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PCYOX1	Q9UHG3	505 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GTF2IRD1	Q9UHL9	959 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	STYXL1	Q9Y6J8	313 aa		11.65	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RASGRF2	O14827	1237 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MAGEB3	O15480	346 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TLL1	O43897	1013 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ASS1	P00966	412 aa	Known RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FGB	P02675	491 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	EIF3B	P55884	814 aa	Known RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MON1B	Q7L1V2	547 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ALDH16A1	Q8IZ83	802 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PWWP2A	Q96N64	755 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GAD1	Q99259	594 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	EVPL	Q92817	2033 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335		F8VP50	259 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ACKR2	O00590	384 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ADAMTS4	O75173	837 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CYP1A1	P04798	512 aa	Predicted RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PSMA2	P25787	234 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	AP3M2	P53677	418 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IST1	P53990	364 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HIC1	Q14526	733 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ARL13B	Q3SXY8	428 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM259	Q4ZIN3	620 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM151B	Q8IW70	566 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KIAA2013	Q8IYS2	634 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	EPS8L3	Q8TE67	593 aa	Known RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ARNTL2	Q8WYA1	636 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CCT6B	Q92526	530 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CALN1	Q9BXU9	219 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SNTG2	Q9NY99	539 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KLHL41	O60662	606 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	UBOX5	O94941	541 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PIGR	P01833	764 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CALB1	P05937	261 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FGFR1	P11362	822 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NQO1	P15559	274 aa	Known RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MRPS6	P82932	125 aa	Known RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GLB1L	Q6UWU2	654 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ZDHHC24	Q6UX98	284 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CCNJL	Q8IV13	435 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SPART	Q8N0X7	666 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PMEPA1	Q969W9	287 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SH3KBP1	Q96B97	665 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HEXIM2	Q96MH2	286 aa	Known RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ZFP42	Q96MM3	310 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LRRC4C	Q9HCJ2	640 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PFDN2	Q9UHV9	154 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ADGRA2	Q96PE1	1338 aa		11.64	□□□□□ -0.55
SUPT5H-216	ENST00000599335		H0YGN5	161 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335		I3L4J1	428 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ASAP2	O43150	1006 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TRAPPC3	O43617	180 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SELP	P16109	830 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ERF	P50548	548 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ITGA8	P53708	1063 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NT5DC4	Q86YG4	428 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	APPL2	Q8NEU8	664 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KIF12	Q96FN5	646 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SLC28A3	Q9HAS3	691 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ZDHHC18	Q9NUE0	388 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GRHL1	Q9NZI5	618 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NOX1	Q9Y5S8	564 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LPXN	O60711	386 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ASMTL	O95671	621 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	F2	P00734	622 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NFIC	P08651	508 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	POLR2B	P30876	1174 aa	Known RBP	11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GATM	P50440	423 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SLC26A2	P50443	739 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	YWHAE	P62258	255 aa	Known RBP	11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HPCA	P84074	193 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SULT2A1	Q06520	285 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KCNT1	Q5JUK3	1230 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CDT1	Q9H211	546 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GMIP	Q9P107	970 aa		11.63	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HBS1L	Q9Y450	684 aa	Known RBP	11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms