RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SIX2Q9NPC8 291 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PLCB1Q9NQ66 1216 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 ITM2CQ9NQX7 267 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 IL17BQ9UHF5 180 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 AGAP1Q9UPQ3 857 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PCDHGA1Q9Y5H4 931 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 SNX9Q9Y5X1 595 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 STON1Q9Y6Q2 735 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 UBR5O95071 2799 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 CABIN1Q9Y6J0 2220 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PHACTR2O75167 634 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 LDOC1O95751 146 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 ASS1P00966 412 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 CDC25BP30305 580 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 OXTRP30559 389 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 ATICP31939 592 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 ACADVLP49748 655 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 KLK7P49862 253 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 BIRC3Q13489 604 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 PKDCCQ504Y2 493 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 KCNT1Q5JUK3 1230 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 C6orf132Q5T0Z8 1188 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 TRIM65Q6PJ69 517 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 TPGS1Q6ZTW0 290 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 ADAT2Q7Z6V5 191 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 TMEM86AQ8N2M4 240 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 LRRC52Q8N7C0 313 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 ZNF248Q8NDW4 579 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 TTC9Q92623 222 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 PRCCQ92733 491 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 TAF4BQ92750 862 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 SIPA1Q96FS4 1042 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 MED8Q96G25 268 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 TTLL2Q9BWV7 592 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 INTS2Q9H0H0 1204 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 C6orf106Q9H6K1 298 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 HEMK1Q9Y5R4 338 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 ITIH6Q6UXX5 1313 aa14.56□□□□□ -0.08
SHKBP1-218ENST00000598907 KNL1Q8NG31 2342 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 F8VP50 259 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 COCHO43405 550 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 ACADMP11310 421 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 TYRP14679 529 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 PCBP4P57723 403 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 MYL6P60660 151 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 TRPC3Q13507 836 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 SGSM1Q2NKQ1 1148 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 PRAMEF14Q5SWL7 426 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 FBXL19Q6PCT2 694 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 VSTM1Q6UX27 236 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 METTL3Q86U44 580 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 TMPRSS6Q8IU80 811 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 FAXDC2Q96IV6 333 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 SLITRK1Q96PX8 696 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 XPO6Q96QU8 1125 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 GANQ9H2C0 597 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 APOBEC3GQ9HC16 384 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 CRTAC1Q9NQ79 661 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 EHD2Q9NZN4 543 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 KNTC1P50748 2209 aa14.55□□□□□ -0.08
SHKBP1-218ENST00000598907 DOPEY2Q9Y3R5 2298 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 CACNG3O60359 315 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 KRT19P08727 400 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 GLDCP23378 1020 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 PIK3CAP42336 1068 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 GRIA4P48058 902 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 PPP3CCP48454 512 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 DGKGP49619 791 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 UCNP55089 124 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 NFATC3Q12968 1075 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 FIGNQ5HY92 759 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 KLHDC7AQ5VTJ3 777 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 KIAA1614Q5VZ46 1190 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 SPECC1LQ69YQ0 1117 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 TATDN2Q93075 761 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 NUP58Q9BVL2 599 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 FAM117AQ9C073 453 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 TTYH3Q9C0H2 523 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 NACA2Q9H009 215 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 CCSER2Q9H7U1 834 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 IGSF5Q9NSI5 407 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 DAAM1Q9Y4D1 1078 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 MYO9AB2RTY4 2548 aa14.54□□□□□ -0.08
SHKBP1-218ENST00000598907 GFRA2O00451 464 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 EPHB6O15197 1021 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 SYNCRIPO60506 623 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 FSBPO95073 299 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 ABCB4P21439 1286 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 LMO2P25791 158 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 CTSKP43235 329 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 LHX1P48742 406 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 NOP14P78316 857 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 APBA1Q02410 837 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 TBX2Q13207 712 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 MDH1BQ5I0G3 518 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 FAM171BQ6P995 826 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 KDM7AQ6ZMT4 941 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 LIMS2Q7Z4I7 341 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms