RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SFMBT1Q9UHJ3 866 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 LRFN2Q9ULH4 789 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 NT5C1B-RDH14C9J2C7 533 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 RNF103O00237 685 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 IRAK2O43187 625 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 MSI1O43347 362 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 LRIG2O94898 1065 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 CXCL10P02778 98 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 BRAFP15056 766 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 GRIA1P42261 906 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 GLUD2P49448 558 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 WASHC5Q12768 1159 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 BTBD8Q5XKL5 378 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 TMEM173Q86WV6 379 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 ATAD1Q8NBU5 361 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 MCUQ8NE86 351 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 ZNF473Q8WTR7 871 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 CASP10Q92851 521 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 TMEM51Q9NW97 253 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 TANC1Q9C0D5 1861 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 A0A1W2PQH9 124 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 RASA4BC9J798 803 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 RASA4O43374 803 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 FAM107AO95990 144 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 ALDH2P05091 517 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 GEMIN4P57678 1058 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 USP46P62068 366 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 MLLT1Q03111 559 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 FPGSQ05932 587 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 SEMA5AQ13591 1074 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 LRRC14Q15048 493 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 NFE2Q16621 373 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 TRABD2AQ86V40 505 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 MGARPQ8TDB4 240 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 FUBP3Q96I24 572 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 PRMT1Q99873 361 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 PLAC1Q9HBJ0 212 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 KCNK9Q9NPC2 374 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 SEPT10Q9P0V9 454 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 SLC24A2Q9UI40 661 aa17.55■□□□□ 0.4
SHKBP1-216ENST00000598201 TSHRP16473 764 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 TPSB2P20231 275 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 FGFR3P22607 806 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 MAGEA3P43357 314 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 PPIGQ13427 754 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 TPSAB1Q15661 275 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 QPCTQ16769 361 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 RSPO2Q6UXX9 243 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 NPAS4Q8IUM7 802 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 COLGALT1Q8NBJ5 622 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 GPR152Q8TDT2 470 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 APBB2Q92870 758 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 VWCEQ96DN2 955 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 EPAS1Q99814 870 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 DHRS4Q9BTZ2 278 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 TRIM62Q9BVG3 475 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 SMOC2Q9H3U7 446 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 KIF9Q9HAQ2 790 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 MLXIPLQ9NP71 852 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 ARHGEF38Q9NXL2 777 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 PCDHB5Q9Y5E4 795 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 TNRC18O15417 2968 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 TCRBV9S1A1TA0A576 114 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 TBKBP1A7MCY6 615 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 KCNK1O00180 336 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 PPP1R12AO14974 1030 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 SOAT2O75908 522 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 EPHB2P29323 1055 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 IFNAR2P48551 515 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 ARPP19P56211 112 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 FUT10Q6P4F1 479 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 ZNF567Q8N184 647 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 ANKRD42Q8N9B4 389 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 BCL7CQ8WUZ0 217 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 CFAP36Q96G28 342 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 C8orf48Q96LL4 319 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 ZNF317Q96PQ6 595 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 PAFAH2Q99487 392 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 FRMD8Q9BZ67 464 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 IL23AQ9NPF7 189 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 PSMC3IPQ9P2W1 217 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 NEU3Q9UQ49 428 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 ACTL7BQ9Y614 415 aa17.54■□□□□ 0.4
SHKBP1-216ENST00000598201 GALTP07902 379 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 RASA2Q15283 850 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 RTP2Q5QGT7 225 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 TAS1R1Q7RTX1 841 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 NUP93Q8N1F7 819 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 MPP5Q8N3R9 675 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 DEPDC1BQ8WUY9 529 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 TRIM56Q9BRZ2 755 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 SIK2Q9H0K1 926 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 FETUBQ9UGM5 382 aa17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 MYO18AQ92614 2054 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-216ENST00000598201 A0A1W2PPM1 405 aa17.52■□□□□ 0.4
SHKBP1-216ENST00000598201 OPHN1O60890 802 aa17.52■□□□□ 0.4
SHKBP1-216ENST00000598201 VNN2O95498 520 aa17.52■□□□□ 0.4
SHKBP1-216ENST00000598201 ACRP10323 421 aa17.52■□□□□ 0.4
SHKBP1-216ENST00000598201 KLHL38Q2WGJ6 581 aa17.52■□□□□ 0.4
SHKBP1-216ENST00000598201 ARTNQ5T4W7 220 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms