RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 ACADMP11310 421 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 EEF1GP26641 437 aaKnown RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 COPAP53621 1224 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 CDK17Q00537 523 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 KCNMA1Q12791 1236 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 EIF4EBP2Q13542 120 aaPredicted RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 CAMK2GQ13555 558 aaPredicted RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 DCAF6Q58WW2 860 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 ZC3H12AQ5D1E8 599 aaKnown RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 TCP11X2Q5H9J9 407 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 C11orf57Q6ZUT1 292 aaPredicted RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 SLC47A2Q86VL8 602 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 SLC41A1Q8IVJ1 513 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 ATP6V0D2Q8N8Y2 350 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 OR2T3Q8NH03 318 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 ENOX1Q8TC92 643 aaKnown RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 WFDC5Q8TCV5 224 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 CYB5D2Q8WUJ1 264 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 GBP4Q96PP9 640 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 NUCKS1Q9H1E3 243 aaKnown RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 SUN2Q9UH99 717 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 AJAP1Q9UKB5 411 aaPredicted RBP23.86■■□□□ 1.41
SSBP4-205ENST00000598159 CEP83Q9Y592 693 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 PES1O00541 588 aaKnown RBP23.85■■□□□ 1.41
SSBP4-205ENST00000598159 MOCS2O96007 188 aaPredicted RBP23.85■■□□□ 1.41
SSBP4-205ENST00000598159 SERPINF2P08697 491 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 SLC2A3P11169 496 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 CD70P32970 193 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 TPMTP51580 245 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 RPS24P62847 133 aaKnown RBP23.85■■□□□ 1.41
SSBP4-205ENST00000598159 TAF5Q15542 800 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 PTPRNQ16849 979 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 KLHDC7AQ5VTJ3 777 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 PASD1Q8IV76 773 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 DEFB106AQ8N104 65 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 TTC17Q96AE7 1141 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 TOE1Q96GM8 510 aaKnown RBP23.85■■□□□ 1.41
SSBP4-205ENST00000598159 LMLNQ96KR4 655 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 PRICKLE1Q96MT3 831 aaPredicted RBP23.85■■□□□ 1.41
SSBP4-205ENST00000598159 SLC2A13Q96QE2 648 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 NUP58Q9BVL2 599 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 FBRSQ9HAH7 460 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 CD93Q9NPY3 652 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 TJP2Q9UDY2 1190 aa23.85■■□□□ 1.41
SSBP4-205ENST00000598159 SPTBN2O15020 2390 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 HSF2BPO75031 334 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 IGLV3-19P01714 112 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 C7P10643 843 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 HLA-EP13747 358 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 DRAP1Q14919 205 aaPredicted RBP23.84■■□□□ 1.41
SSBP4-205ENST00000598159 WDR45BQ5MNZ6 344 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 OR6B2Q6IFH4 312 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 RGL4Q8IZJ4 473 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 CARNMT1Q8N4J0 409 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 CADM4Q8NFZ8 388 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 HSPA12BQ96MM6 686 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 NFE2L3Q9Y4A8 694 aa23.84■■□□□ 1.41
SSBP4-205ENST00000598159 CNOT1A5YKK6 2376 aaKnown RBP23.84■■□□□ 1.41
SSBP4-205ENST00000598159 ATXN2Q99700 1313 aaKnown RBP23.84■■□□□ 1.41
SSBP4-205ENST00000598159 KCNU1A8MYU2 1149 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 KCNK5O95279 499 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 ASLP04424 464 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 CFIP05156 583 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 ENGP17813 658 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 ABCB4P21439 1286 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 TACR2P21452 398 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 KCNA4P22459 653 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 GFPT1Q06210 699 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-205ENST00000598159 MTA1Q13330 715 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 CDH18Q13634 790 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 RAPGEF1Q13905 1077 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 ZDHHC17Q8IUH5 632 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 LGI2Q8N0V4 545 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 CFAP52Q8N1V2 620 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 C1orf131Q8NDD1 294 aaKnown RBP23.83■■□□□ 1.41
SSBP4-205ENST00000598159 MYEOVQ96EZ4 313 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 PDCL3Q9H2J4 239 aa23.83■■□□□ 1.41
SSBP4-205ENST00000598159 KIAA1522Q9P206 1035 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-205ENST00000598159 XPO7Q9UIA9 1087 aaKnown RBP23.83■■□□□ 1.41
SSBP4-205ENST00000598159 H0Y626 953 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 LUC7L3O95232 432 aaKnown RBP23.82■■□□□ 1.4
SSBP4-205ENST00000598159 MOCS3O95396 460 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 CCR1P32246 355 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 ST8SIA6P61647 398 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 PITX1P78337 314 aaPredicted RBP23.82■■□□□ 1.4
SSBP4-205ENST00000598159 SLC6A3Q01959 620 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 RAP1GAP2Q684P5 730 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 FAM183BPQ6ZVS7 135 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 TMEM35BQ8NCS4 154 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 ZNF397Q8NF99 534 aaPredicted RBP23.82■■□□□ 1.4
SSBP4-205ENST00000598159 RNF34Q969K3 372 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 SYNCQ9H7C4 482 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 FAM204AQ9H8W3 233 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 PRSS16Q9NQE7 514 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 DDIT4Q9NX09 232 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 SUSD2Q9UGT4 822 aa23.82■■□□□ 1.4
SSBP4-205ENST00000598159 F5H5T6 163 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 ERBB2P04626 1255 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 PNMA6AP0CW24 399 aaPredicted RBP23.81■■□□□ 1.4
SSBP4-205ENST00000598159 UCHL3P15374 230 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms