RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 HNRNPLP14866 589 aaKnown RBP eCLIP22.68■■□□□ 1.22
HOMER3-206ENST00000594439 PDGFRAP16234 1089 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 HLA-FP30511 346 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 RFC1P35251 1148 aaPredicted RBP22.68■■□□□ 1.22
HOMER3-206ENST00000594439 PTPN9P43378 593 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 CCDC14Q49A88 953 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 ZC3H14Q6PJT7 736 aaKnown RBP22.68■■□□□ 1.22
HOMER3-206ENST00000594439 SND1Q7KZF4 910 aaKnown RBP eCLIP22.68■■□□□ 1.22
HOMER3-206ENST00000594439 KIAA0907Q7Z7F0 614 aaPredicted RBP22.68■■□□□ 1.22
HOMER3-206ENST00000594439 CFAP52Q8N1V2 620 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 CAMKK1Q8N5S9 505 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 VCPIP1Q96JH7 1222 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 HHIPQ96QV1 700 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 TKTL2Q9H0I9 626 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 WDCPQ9H6R7 721 aa22.68■■□□□ 1.22
HOMER3-206ENST00000594439 BZW2Q9Y6E2 419 aaKnown RBP22.68■■□□□ 1.22
HOMER3-206ENST00000594439 F5H5T6 163 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 SERPING1P05155 500 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 RRM1P23921 792 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 SDC4P31431 198 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 RDXP35241 583 aaKnown RBP22.67■■□□□ 1.22
HOMER3-206ENST00000594439 C15orf59Q2T9L4 293 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-206ENST00000594439 TDRD12Q587J7 1177 aaKnown RBP22.67■■□□□ 1.22
HOMER3-206ENST00000594439 EOGTQ5NDL2 527 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 PPP1R15BQ5SWA1 713 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 TMEM215Q68D42 235 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 HEATR6Q6AI08 1181 aaKnown RBP22.67■■□□□ 1.22
HOMER3-206ENST00000594439 DNAJC24Q6P3W2 148 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 WDR59Q6PJI9 974 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 SARM1Q6SZW1 724 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 TMEM92Q6UXU6 159 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 DNAAF5Q86Y56 855 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 ATRIPQ8WXE1 791 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 LMLNQ96KR4 655 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 ACOX2Q99424 681 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 RBSNQ9H1K0 784 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 ABCB8Q9NUT2 735 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 HS3ST4Q9Y661 456 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 EML5Q05BV3 1969 aa22.67■■□□□ 1.22
HOMER3-206ENST00000594439 TYW5A2RUC4 315 aaKnown RBP22.66■■□□□ 1.22
HOMER3-206ENST00000594439 PXNP49023 591 aaPredicted RBP22.66■■□□□ 1.22
HOMER3-206ENST00000594439 ATP11AP98196 1134 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 TRIM14Q14142 442 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 CRY1Q16526 586 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 RAB6CQ53S08 254 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 FBXL22Q6P050 247 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 TRMT11Q7Z4G4 463 aaKnown RBP22.66■■□□□ 1.22
HOMER3-206ENST00000594439 WDR5BQ86VZ2 330 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 LONP2Q86WA8 852 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 MFN1Q8IWA4 741 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 FIBINQ8TAL6 211 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 WFIKKN2Q8TEU8 576 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 CENPIQ92674 756 aaPredicted RBP22.66■■□□□ 1.22
HOMER3-206ENST00000594439 RAB6CQ9H0N0 254 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 ELOVL2Q9NXB9 296 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 GGA2Q9UJY4 613 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 PAXBP1Q9Y5B6 917 aa22.66■■□□□ 1.22
HOMER3-206ENST00000594439 CCDC163A0A0D9SF12 145 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 RTN2O75298 545 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 LUC7L3O95232 432 aaKnown RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 APBB3O95704 486 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 FTLP02792 175 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 PLEKP08567 350 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 PABPC1P11940 636 aaKnown RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 GPD1P21695 349 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 NTSR1P30989 418 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 HNRNPH3P31942 346 aaKnown RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 CD70P32970 193 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 GGCXP38435 758 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 WASP42768 502 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 AUHQ13825 339 aaKnown RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 EIF4HQ15056 248 aaKnown RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 SH3PXD2AQ5TCZ1 1133 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 STRADAQ7RTN6 431 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 C14orf80Q86SX3 495 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 FAM131BQ86XD5 332 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 GAS2L3Q86XJ1 694 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 CARNMT1Q8N4J0 409 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 ZNF557Q8N988 423 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 TSTD1Q8NFU3 115 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 IGSF8Q969P0 613 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 TMPRSS4Q9NRS4 437 aa22.65■■□□□ 1.22
HOMER3-206ENST00000594439 THAP10Q9P2Z0 257 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-206ENST00000594439 TIMM44O43615 452 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 DGKEP52429 567 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 RPL7AP62424 266 aaKnown RBP22.64■■□□□ 1.21
HOMER3-206ENST00000594439 LMAN2Q12907 356 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 CDO1Q16878 200 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 C5orf22Q49AR2 442 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 RABGAP1LQ5R372 815 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 PLEKHA7Q6IQ23 1121 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 CHST9Q7L1S5 443 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 ADIPOR2Q86V24 386 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 CHPFQ8IZ52 775 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 UCMAQ8WVF2 138 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 MCEEQ96PE7 176 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 GABRG3Q99928 467 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 SIK2Q9H0K1 926 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 ISCUQ9H1K1 167 aa22.64■■□□□ 1.21
HOMER3-206ENST00000594439 SEMA4AQ9H3S1 761 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms