RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 RBL1P28749 1068 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 GGCXP38435 758 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 HSPA9P38646 679 aaKnown RBP15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 TUBP50607 506 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 GDF10P55107 478 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 HSP90B2PQ58FF3 399 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 CFAP58Q5T655 872 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 KLHDC10Q6PID8 442 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 ZDHHC24Q6UX98 284 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 PRUNE1Q86TP1 453 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 CCDC25Q86WR0 208 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 GOLGA6L1Q8N7Z2 621 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 UBLCP1Q8WVY7 318 aaPredicted RBP15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 SAMD11Q96NU1 681 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 QKIQ96PU8 341 aaKnown RBP eCLIP15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 C17orf80Q9BSJ5 609 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 PAK5Q9P286 719 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 ATP8A1Q9Y2Q0 1164 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 SNX10Q9Y5X0 201 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 HS3ST4Q9Y661 456 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 PLXNA4Q9HCM2 1894 aa15.38■□□□□ 0.05
GTF2F1-202ENST00000593678 CCDC85CA6NKD9 419 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 SMAPO00193 183 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 SASH3O75995 380 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 IVDP26440 423 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 HARS2P49590 506 aaKnown RBP15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 ERVFC1P60507 584 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 COG7P83436 770 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 NRG1Q02297 640 aaPredicted RBP15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 AP1B1Q10567 949 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 MORF4L2Q15014 288 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 TMC3Q7Z5M5 1100 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 MRPL43Q8N983 215 aaKnown RBP15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 GLIS1Q8NBF1 620 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 KREMEN2Q8NCW0 462 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 GCNAQ96QF7 691 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 FOXP3Q9BZS1 431 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 BRD8Q9H0E9 1235 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 HPCAL4Q9UM19 191 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 CLUHO75153 1309 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 C2orf71A6NGG8 1288 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 E9PAM4 449 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 C5orf67F2Z3F1 127 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 C8AP07357 584 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 RPL22P35268 128 aaKnown RBP15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 MLLT6P55198 1093 aaPredicted RBP15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 FAM193AP78312 1265 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 BASP1P80723 227 aaKnown RBP15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 SLC10A2Q12908 348 aaPredicted RBP15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 ALS2CLQ60I27 953 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 B4GALNT4Q76KP1 1039 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 PPIL6Q8IXY8 311 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 LZTR1Q8N653 840 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 SPPL3Q8TCT6 385 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 HTR3CQ8WXA8 447 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 OLFM3Q96PB7 478 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 KLC2Q9H0B6 622 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 MFHAS1Q9Y4C4 1052 aa15.37■□□□□ 0.05
GTF2F1-202ENST00000593678 MTSS1O43312 755 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 CA3P07451 260 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 SLC11A2P49281 568 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 PMS2P54278 862 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 SPDYCQ5MJ68 293 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 PPM1LQ5SGD2 360 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 C9orf50Q5SZB4 431 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 HIBCHQ6NVY1 386 aaPredicted RBP15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 ARHGEF18Q6ZSZ5 1173 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 CCDC33Q8N5R6 958 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 PLD4Q96BZ4 506 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 RTP4Q96DX8 246 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 ABHD8Q96I13 439 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 TGS1Q96RS0 853 aaKnown RBP15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 USP29Q9HBJ7 922 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 TRPC7Q9HCX4 862 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 SHOC2Q9UQ13 582 aa15.36■□□□□ 0.05
GTF2F1-202ENST00000593678 COCHO43405 550 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 PPFIA2O75334 1257 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 HOXC13P31276 330 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 MS4A13Q5J8X5 152 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 PIK3R6Q5UE93 754 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 ELMSAN1Q6PJG2 1045 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 HOOK3Q86VS8 718 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 CHSY1Q86X52 802 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 MRPS31Q92665 395 aaKnown RBP15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 LGMNQ99538 433 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 SEPT10Q9P0V9 454 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 XPO7Q9UIA9 1087 aaKnown RBP15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 VANGL2Q9ULK5 521 aa15.35■□□□□ 0.05
GTF2F1-202ENST00000593678 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 HIDE1A8MVS5 230 aa15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 IGLV3-27P01718 113 aa15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 MYOGP15173 224 aa15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 AUHQ13825 339 aaKnown RBP15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 SHHQ15465 462 aa15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 LILRA6Q6PI73 481 aa15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 RTL10Q7L3V2 364 aa15.34■□□□□ 0.05
GTF2F1-202ENST00000593678 ZCCHC9Q8N567 271 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms