RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 GTPBP10A4D1E9 387 aaKnown RBP13.78□□□□□ -0.2
APOC1-209ENST00000592885 PIK3R2O00459 728 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 GADD45BO75293 160 aaPredicted RBP13.78□□□□□ -0.2
APOC1-209ENST00000592885 FYNP06241 537 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 ZNF883P0CG24 379 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 HLA-EP13747 358 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 GNA15P30679 374 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 SLC6A4P31645 630 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 RDXP35241 583 aaKnown RBP13.78□□□□□ -0.2
APOC1-209ENST00000592885 SGSHP51688 502 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 UBE2HP62256 183 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 GRIK2Q13002 908 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 TTC31Q49AM3 519 aaPredicted RBP13.78□□□□□ -0.2
APOC1-209ENST00000592885 RFWD3Q6PCD5 774 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 TRIM65Q6PJ69 517 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 IL27RAQ6UWB1 636 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 CYB5D2Q8WUJ1 264 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 TTC17Q96AE7 1141 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 SLC39A13Q96H72 371 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 PRICKLE1Q96MT3 831 aaPredicted RBP13.78□□□□□ -0.2
APOC1-209ENST00000592885 MED15Q96RN5 788 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 POPDC2Q9HBU9 364 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 UBE2TQ9NPD8 197 aaPredicted RBP13.78□□□□□ -0.2
APOC1-209ENST00000592885 FSCN3Q9NQT6 498 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 ST7Q9NRC1 585 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 KIAA1468Q9P260 1216 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 SCML1Q9UN30 329 aa13.78□□□□□ -0.2
APOC1-209ENST00000592885 CAPN9O14815 690 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 BCAT2O15382 392 aaPredicted RBP13.77□□□□□ -0.21
APOC1-209ENST00000592885 THAP12O43422 761 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 CER1O95813 267 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 APOEP02649 317 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 DNTTP04053 509 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 CD59P13987 128 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.21
APOC1-209ENST00000592885 CD70P32970 193 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 ST8SIA6P61647 398 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 SIM1P81133 766 aaPredicted RBP13.77□□□□□ -0.21
APOC1-209ENST00000592885 SFSWAPQ12872 951 aaKnown RBP13.77□□□□□ -0.21
APOC1-209ENST00000592885 MTA1Q13330 715 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 CDH18Q13634 790 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 ARID5BQ14865 1188 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 MS4A13Q5J8X5 152 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 ZNF776Q68DI1 518 aaPredicted RBP13.77□□□□□ -0.21
APOC1-209ENST00000592885 NADSYN1Q6IA69 706 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 TMEM110Q86TL2 294 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 TAC4Q86UU9 113 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 SCUBE3Q8IX30 993 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.21
APOC1-209ENST00000592885 WFDC5Q8TCV5 224 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 LMLNQ96KR4 655 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 BTN2A3PQ96KV6 586 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 OSGEPQ9NPF4 335 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 APEX2Q9UBZ4 518 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 NAALADL1Q9UQQ1 740 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 NEUROG3Q9Y4Z2 214 aa13.77□□□□□ -0.21
APOC1-209ENST00000592885 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 GOLGA6L7A0A1B0GV03 622 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 E5RJQ4 531 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 PAPSS1O43252 624 aaPredicted RBP13.76□□□□□ -0.21
APOC1-209ENST00000592885 KRT37O76014 449 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 LETM1O95202 739 aaPredicted RBP13.76□□□□□ -0.21
APOC1-209ENST00000592885 MOCS3O95396 460 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 CALCAP01258 141 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 IGLV3-25P01717 112 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 GLI1P08151 1106 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 RPS14P62263 151 aaKnown RBP13.76□□□□□ -0.21
APOC1-209ENST00000592885 PDCLQ13371 301 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 ZNF423Q2M1K9 1284 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 TTC39BQ5VTQ0 682 aaPredicted RBP13.76□□□□□ -0.21
APOC1-209ENST00000592885 DENND1BQ6P3S1 775 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 GBP6Q6ZN66 633 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 USP30Q70CQ3 517 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 CACUL1Q86Y37 369 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 ZNF606Q8WXB4 792 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 TMEM121BQ9BXQ6 578 aaPredicted RBP13.76□□□□□ -0.21
APOC1-209ENST00000592885 BTBD1Q9H0C5 482 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 MIR1-1HGQ9H1L0 117 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 RSPH9Q9H1X1 276 aaPredicted RBP13.76□□□□□ -0.21
APOC1-209ENST00000592885 THAP9Q9H5L6 903 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 SGK2Q9HBY8 427 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 PRSS16Q9NQE7 514 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 ASNSD1Q9NWL6 643 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 TJP2Q9UDY2 1190 aa13.76□□□□□ -0.21
APOC1-209ENST00000592885 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 RNASEH1O60930 286 aaKnown RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 LUC7L3O95232 432 aaKnown RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 SEMA4FO95754 770 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 SRPRAP08240 638 aaKnown RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 SLC2A3P11169 496 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 MAOBP27338 520 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 CSKP41240 450 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 MATKP42679 507 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 AFF3P51826 1226 aaKnown RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 YWHAZP63104 245 aaKnown RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 SLC12A1Q13621 1099 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 EXOC3L4Q17RC7 722 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 HNRNPA1L2Q32P51 320 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms