RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SPACA7Q96KW9 195 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 NPY6RQ99463 290 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 RTN4Q9NQC3 1192 aaKnown RBP28.21■■■□□ 2.11
SMAD4-213ENST00000591914 SEMA4GQ9NTN9 838 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 CALCOCO1Q9P1Z2 691 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 STIM2Q9P246 746 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 SLC12A6Q9UHW9 1150 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 PCDHGA5Q9Y5G8 931 aa28.21■■■□□ 2.11
SMAD4-213ENST00000591914 MUC22E2RYF6 1773 aaPredicted RBP28.2■■■□□ 2.11
SMAD4-213ENST00000591914 SYNJ2BP-COX16A0A087WUM0 186 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 SYCE3A1L190 88 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 NDUFV2P19404 249 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 ABCB4P21439 1286 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 TACR2P21452 398 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 CD70P32970 193 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 BYSLQ13895 437 aaKnown RBP28.2■■■□□ 2.1
SMAD4-213ENST00000591914 C2CD6Q53TS8 623 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 FAM102AQ5T9C2 384 aaPredicted RBP28.2■■■□□ 2.1
SMAD4-213ENST00000591914 CHST9Q7L1S5 443 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 CHSY1Q86X52 802 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 LGI2Q8N0V4 545 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 PRMT1Q99873 361 aaKnown RBP28.2■■■□□ 2.1
SMAD4-213ENST00000591914 ADAM33Q9BZ11 813 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 ARRDC1-AS1Q9H2J1 176 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.2■■■□□ 2.1
SMAD4-213ENST00000591914 COX16Q9P0S2 106 aa28.2■■■□□ 2.1
SMAD4-213ENST00000591914 FAM170AA1A519 330 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 M0QYT0 321 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 ZBTB24O43167 697 aaPredicted RBP28.19■■■□□ 2.1
SMAD4-213ENST00000591914 TEX33O43247 280 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 PTMSP20962 102 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 RNASE9P60153 205 aaKnown RBP28.19■■■□□ 2.1
SMAD4-213ENST00000591914 LMNB2Q03252 620 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 NME3Q13232 169 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 MTA1Q13330 715 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 STARD3Q14849 445 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 TRIM72Q6ZMU5 477 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 CFAP52Q8N1V2 620 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 RNF34Q969K3 372 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 RALGAPA1Q6GYQ0 2036 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 ABCA7Q8IZY2 2146 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 CEP250Q9BV73 2442 aa28.19■■■□□ 2.1
SMAD4-213ENST00000591914 MMP8P22894 467 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 ARID5AQ03989 594 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 FUT11Q495W5 492 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 MBLAC2Q68D91 279 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 FRMD1Q8N878 549 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 ERLEC1Q96DZ1 483 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 PGAP3Q96FM1 320 aaPredicted RBP28.18■■■□□ 2.1
SMAD4-213ENST00000591914 MRGPRX1Q96LB2 322 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 PIGVQ9NUD9 493 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 MBD1Q9UIS9 605 aaPredicted RBP28.18■■■□□ 2.1
SMAD4-213ENST00000591914 TMEM59LQ9UK28 342 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 STAP1Q9ULZ2 295 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 CKAP5Q14008 2032 aa28.18■■■□□ 2.1
SMAD4-213ENST00000591914 F5H5T6 163 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 TFE3P19532 575 aaPredicted RBP28.17■■■□□ 2.1
SMAD4-213ENST00000591914 PRKCHP24723 683 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 LMAN2Q12907 356 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 SLC25A52Q3SY17 297 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 PLA2G2CQ5R387 149 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 SERPINA13PQ6UXR4 307 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 ARCQ7LC44 396 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 CARNMT1Q8N4J0 409 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 TMEM245Q9H330 911 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 PLA2G4CQ9UP65 541 aa28.17■■■□□ 2.1
SMAD4-213ENST00000591914 GOLGA8SH3BPF8 625 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 FOXD2O60548 495 aaPredicted RBP28.16■■■□□ 2.1
SMAD4-213ENST00000591914 LUC7L3O95232 432 aaKnown RBP28.16■■■□□ 2.1
SMAD4-213ENST00000591914 DLDP09622 509 aaKnown RBP28.16■■■□□ 2.1
SMAD4-213ENST00000591914 FLT3P36888 993 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 CXCR3P49682 368 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 CDH18Q13634 790 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 PTPRNQ16849 979 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 FSCBQ5H9T9 825 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 PRR23CQ6ZRP0 262 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 MMS22LQ6ZRQ5 1243 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 CYB5D2Q8WUJ1 264 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 RMDN1Q96DB5 314 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 PCDHB18PQ96TA0 734 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 SLC6A17Q9H1V8 727 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.16■■■□□ 2.1
SMAD4-213ENST00000591914 THADAQ6YHU6 1953 aa28.16■■■□□ 2.1
SMAD4-213ENST00000591914 BCLAF3A2AJT9 711 aaKnown RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 PRR5-ARHGAP8B1AHC4 643 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 SYNCRIPO60506 623 aaKnown RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 ZNF217O75362 1048 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 ATP5BP06576 529 aaKnown RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 ZNF806P0C7X5 589 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 UNGP13051 313 aaPredicted RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 POLR2EP19388 210 aaKnown RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 MPLP40238 635 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 ID4P47928 161 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 SULT1E1P49888 294 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 ARHGAP8P85298 464 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 FILIP1LQ4L180 1135 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 BRMS1LQ5PSV4 323 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 TTC39BQ5VTQ0 682 aaPredicted RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 TRNP1Q6NT89 227 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 CCDC117Q8IWD4 279 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms