RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 KRCC1Q9NPI7 259 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 TBC1D13Q9NVG8 400 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 IFRD1O00458 451 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 SELPP16109 830 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 RRM1P23921 792 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 KCNT1Q5JUK3 1230 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 TRAF7Q6Q0C0 670 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 LRRC8DQ7L1W4 858 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 SLC22A9Q8IVM8 553 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 LGI2Q8N0V4 545 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF606Q8WXB4 792 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 ZBTB45Q96K62 511 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 NCKIPSDQ9NZQ3 722 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 DNAJC16Q9Y2G8 782 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 DYRK3O43781 588 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 ATP6V1G2O95670 118 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 EPB42P16452 691 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF23P17027 643 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 CCDC142Q17RM4 750 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 IYDQ6PHW0 289 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 TATDN2Q93075 761 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 VPS33AQ96AX1 596 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 BBS2Q9BXC9 721 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 FBXO10Q9UK96 956 aa13.62□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF839A8K0R7 811 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 F8W810 466 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 GUCA1CO95843 209 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CLPTM1O96005 669 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 LAG3P18627 525 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 GLRA2P23416 452 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 RAD23AP54725 363 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 AQP5P55064 265 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 NCALDP61601 193 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 DENND5BQ6ZUT9 1274 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 ANKZF1Q9H8Y5 726 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 COPS7BQ9H9Q2 264 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 SYTL2Q9HCH5 934 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 RNF112Q9ULX5 631 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MAGEB16A2A368 324 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 YDJCA8MPS7 323 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 RNF103O00237 685 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 IFNA14P01570 189 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 NCKAP1LP55160 1127 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CNTN1Q12860 1018 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CLEC16AQ2KHT3 1053 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 TMPRSS6Q8IU80 811 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CENPLQ8N0S6 344 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 EMC1Q8N766 993 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MMADHCQ9H3L0 296 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 ABCC13Q9NSE7 274 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 RBM22Q9NW64 420 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MARCH2Q9P0N8 246 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 TFR2Q9UP52 801 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 UBOX5O94941 541 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 GNRH1P01148 92 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MPOP05164 745 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 SOAT1P35610 550 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 TUBP50607 506 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 ZNF135P52742 658 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 GRIK3Q13003 919 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 C2CD6Q53TS8 623 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CEP78Q5JTW2 689 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 HECTD3Q5T447 861 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MFSD4BQ5TF39 518 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CORO1BQ9BR76 489 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 FAM153AQ9UHL3 310 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MEIS2O14770 477 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 LTFP02788 710 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CYP2A6P11509 494 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 CPA3P15088 417 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 KRT20P35900 424 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 PRIM2P49643 509 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MGAT5Q09328 741 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 PKN2Q16513 984 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 ERMARDQ5T6L9 678 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 IRAK1BP1Q5VVH5 260 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 RGL4Q8IZJ4 473 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 MYO1HQ8N1T3 1032 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 LACRTQ9GZZ8 138 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 ARHGAP20Q9P2F6 1191 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 RUVBL2Q9Y230 463 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 COL1A2P08123 1366 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 LTN1O94822 1766 aa13.61□□□□□ -0.23
SMARCA4-216ENST00000591545 PTPN1P18031 435 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 RAB14P61106 215 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PSMD5Q16401 504 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 KHDRBS2Q5VWX1 349 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 DCLRE1AQ6PJP8 1040 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CCDC81Q6ZN84 652 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 SEZ6LQ9BYH1 1024 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 PRRG3Q9BZD7 231 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 VTI1BQ9UEU0 232 aa13.6□□□□□ -0.23
SMARCA4-216ENST00000591545 CDH9Q9ULB4 789 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms