RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SEMA4GQ9NTN9 838 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.41
TPM4-212ENST00000590180 GGA2Q9UJY4 613 aa12.52□□□□□ -0.41
TPM4-212ENST00000590180 F5H5T6 163 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 H0Y626 953 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 LRP3O75074 770 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 DAB1O75553 588 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 IGLV3-25P01717 112 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
TPM4-212ENST00000590180 EPHX1P07099 455 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 CHRNB2P17787 502 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 BCKDHBP21953 392 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 TGM1P22735 817 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 CD70P32970 193 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 P2RY2P41231 377 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 GABRB2P47870 512 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 ID4P47928 161 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 DHPSP49366 369 aaPredicted RBP12.51□□□□□ -0.41
TPM4-212ENST00000590180 ZNF234Q14588 700 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 CSRP2Q16527 193 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 FNDC3BQ53EP0 1204 aaKnown RBP12.51□□□□□ -0.41
TPM4-212ENST00000590180 MBLAC2Q68D91 279 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 KIAA1324Q6UXG2 1013 aaKnown RBP12.51□□□□□ -0.41
TPM4-212ENST00000590180 SERPINA13PQ6UXR4 307 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
TPM4-212ENST00000590180 LPCAT2Q7L5N7 544 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 FIBINQ8TAL6 211 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 WFDC5Q8TCV5 224 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 SLC6A17Q9H1V8 727 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 WDCPQ9H6R7 721 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
TPM4-212ENST00000590180 RRN3Q9NYV6 651 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 NOCTQ9UK39 431 aaKnown RBP12.51□□□□□ -0.41
TPM4-212ENST00000590180 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
TPM4-212ENST00000590180 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 PRR5-ARHGAP8B1AHC4 643 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 EPN2O95208 641 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 F9P00740 461 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 SERPINC1P01008 464 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 HLA-EP13747 358 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 NDUFV2P19404 249 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 SULT1E1P49888 294 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 NOMO3P69849 1222 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 ARHGAP8P85298 464 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 FMO1Q01740 532 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 LMNB2Q03252 620 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 DEUP1Q05D60 604 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 LMAN2Q12907 356 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 EIF4EBP2Q13542 120 aaPredicted RBP12.5□□□□□ -0.41
TPM4-212ENST00000590180 CDH18Q13634 790 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 RSPO4Q2I0M5 234 aaPredicted RBP12.5□□□□□ -0.41
TPM4-212ENST00000590180 MAP7D1Q3KQU3 841 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 TRIM72Q6ZMU5 477 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 MMS22LQ6ZRQ5 1243 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 ADIPOR2Q86V24 386 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 TMPRSS6Q8IU80 811 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 TMEFF1Q8IYR6 380 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 AHI1Q8N157 1196 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 DEFB119Q8N690 84 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM4-212ENST00000590180 SLC30A5Q8TAD4 765 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 PRICKLE1Q96MT3 831 aaPredicted RBP12.5□□□□□ -0.41
TPM4-212ENST00000590180 NPY6RQ99463 290 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 SIK2Q9H0K1 926 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 PRDM16Q9HAZ2 1276 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 CALCOCO1Q9P1Z2 691 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 KIAA1522Q9P206 1035 aaPredicted RBP12.5□□□□□ -0.41
TPM4-212ENST00000590180 CYP8B1Q9UNU6 501 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 PCDHGA5Q9Y5G8 931 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
TPM4-212ENST00000590180 RALGAPA1Q6GYQ0 2036 aa12.5□□□□□ -0.41
TPM4-212ENST00000590180 ZNF217O75362 1048 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 LUC7L3O95232 432 aaKnown RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 MOCS3O95396 460 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 CAVIN2O95810 425 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 CYP1A1P04798 512 aaPredicted RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 DLDP09622 509 aaKnown RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 CCDC172P0C7W6 258 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 TFE3P19532 575 aaPredicted RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 PRKCHP24723 683 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 SCNN1AP37088 669 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 ST8SIA6P61647 398 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 TPM4P67936 248 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 MTA1Q13330 715 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 AUHQ13825 339 aaKnown RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 IQCB1Q15051 598 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 FUT11Q495W5 492 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 FSCBQ5H9T9 825 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 RABGAP1LQ5R372 815 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 PMS2CLQ68D20 193 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 SLC36A4Q6YBV0 504 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 PRR23CQ6ZRP0 262 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 ARMCX6Q7L4S7 300 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 KIAA0907Q7Z7F0 614 aaPredicted RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 ZNF366Q8N895 744 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 C12orf50Q8NA57 414 aaPredicted RBP12.49□□□□□ -0.41
TPM4-212ENST00000590180 PIGKQ92643 395 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 RMDN1Q96DB5 314 aa12.49□□□□□ -0.41
TPM4-212ENST00000590180 MRGPRX1Q96LB2 322 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms